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The map label for this gene is 218709610

Identifier: 218709610

GI number: 218709610

Start: 1736224

End: 1737795

Strand: Direct

Name: 218709610

Synonym: VS_1620

Alternate gene names: NA

Gene position: 1736224-1737795 (Clockwise)

Preceding gene: 218709609

Following gene: 218709611

Centisome position: 52.62

GC content: 45.87

Gene sequence:

>1572_bases
ATGAACTTCAAAACCGTGCGCCTTGTCTTAGGCGACCAGCTAAATATAGAGCACTCATGGTTTCGACAGGTTAACGATGA
CGTTATTTACATCATTGCTGAGCTCAAACAAGAAACGGATTATGTTGCATCTCACATTCAAAAAGTGGCCGCGTTTTTCT
GTGCGATGGGTTACTTCGCTGACGGACTAAAAGAACAAGGCCATCAAGTACTCCACCTAACTCTTGACGACACAACGCAA
TTTGAAAACCTAGATAAACTTCTAAAGCACTATGTACATGAATTCGGCGCAGAGAAGTTTGAATATCAAAGGCCAGATGA
ATATCGCCTCTTAGAGCAGATGAATAAGCTCAAGCTCACCAATGCGACCAAAGGCTGTTGTGATACGGAACACTTCCTCT
TGCCATTCGAAGAGATCGAACAACAGTTTCCGAAAGACAAACACATCATGATGGAGCACTTCTATCGCCGAATGAGAAAG
CGTTTCGACATTTTGTTAGAAGACGGAAAGCCCGTTGGTGGCAAATGGAATTACGACGCGAACAATCGAAAGAAACTCAA
GAAACAAGACATTGAAAACTTACCTCAGCCTCTGATGTTTACCAATGACATAACAGACATTTTGCAGCGTATCGAGCGCC
ACCAAGTGCAAACCATTGGTCAAGTCGGTAGCCAATTATTATGGCCGGTGAAACGCGCACAAAGTTTGTCTCTGCTCGCT
CATTTCTGCCAAGTCTGCTTACCGTTATTTGGGCAGTTTCAAGATGCGATGACGACAGACCACGACTCTAAATGGAGCTT
GTATCATAGCCGCATTTCGTTCTCGCTGAACAGTAAACTGCTGAGCCCTAAAGAAGTGATTGATGCAGCACTGTCGGCCT
ACCAAGCATCCAGTCATCGAGACAGTTCTTCAAATAAACCAAACATCGACATTGCACAAGTCGAAGGGTTTGTACGCCAA
ATACTGGGGTGGCGAGAGTACATACGCGCCGTCTATTGGGCAAACATGCCTGCTTACGCCAACAAAAACCATTATTCAGC
AGACAACAACCTGCCCCATTACTTTTGGGACGGACAAACCAAGATGAACTGCATGAAGCATGCGATTGACCAGTCTCTCG
AGTTTGCTTACGCGCACCACATCCAAAGGTTAATGATCACTGGCAACTTCTGCTTAATTACGGGTATAGACCCCGACCAA
GTAGACAATTGGTACCTCGGTATTTACGTCGACGCAATTGAGTGGGTTGAAATGCCAAATACGCGAGGTATGGCACTGTT
TGCGGATGGCGGGATCGTCGGAACCAAACCATACTCTGCCAGCGGTTCCTATATCAACCGCATGAGTGACTACTGCAAAG
GCTGTCACTACAAGATAAAAGAACGCAGCGGCGAGCAATCTTGCCCTTTCAATAGCTTGTATTGGCGCTTTATGAACCTG
CACCGCGATGCGTTAAACCGCAACCCACGAATGGGTATGCTATATCGCTCTTGGGACAACATGGACGAGCAATCACAACA
AGCGATTCTCGATACCGCTGAACAACGAATCACAAACTTGGAGAACTTATAA

Upstream 100 bases:

>100_bases
TGGGTAAGCAAACGAATATGTACGATCCAGACCATGCGTTTATCAATAAGTGGAATGCGAGCAGCAAAGAACCTGTCTTA
ACTAACAATCAGGATGTGTT

Downstream 100 bases:

>100_bases
TGGTGGAGCAACTCAGAATACACATATTGGTGGTCGGTGGGAGCGGCGGTATTGGTTTCGCTGTGGTTAAACACCTATTA
TCTGAGCTCTCTCGGTTTGA

Product: deoxyribodipyrimidine photolyase-like protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MNFKTVRLVLGDQLNIEHSWFRQVNDDVIYIIAELKQETDYVASHIQKVAAFFCAMGYFADGLKEQGHQVLHLTLDDTTQ
FENLDKLLKHYVHEFGAEKFEYQRPDEYRLLEQMNKLKLTNATKGCCDTEHFLLPFEEIEQQFPKDKHIMMEHFYRRMRK
RFDILLEDGKPVGGKWNYDANNRKKLKKQDIENLPQPLMFTNDITDILQRIERHQVQTIGQVGSQLLWPVKRAQSLSLLA
HFCQVCLPLFGQFQDAMTTDHDSKWSLYHSRISFSLNSKLLSPKEVIDAALSAYQASSHRDSSSNKPNIDIAQVEGFVRQ
ILGWREYIRAVYWANMPAYANKNHYSADNNLPHYFWDGQTKMNCMKHAIDQSLEFAYAHHIQRLMITGNFCLITGIDPDQ
VDNWYLGIYVDAIEWVEMPNTRGMALFADGGIVGTKPYSASGSYINRMSDYCKGCHYKIKERSGEQSCPFNSLYWRFMNL
HRDALNRNPRMGMLYRSWDNMDEQSQQAILDTAEQRITNLENL

Sequences:

>Translated_523_residues
MNFKTVRLVLGDQLNIEHSWFRQVNDDVIYIIAELKQETDYVASHIQKVAAFFCAMGYFADGLKEQGHQVLHLTLDDTTQ
FENLDKLLKHYVHEFGAEKFEYQRPDEYRLLEQMNKLKLTNATKGCCDTEHFLLPFEEIEQQFPKDKHIMMEHFYRRMRK
RFDILLEDGKPVGGKWNYDANNRKKLKKQDIENLPQPLMFTNDITDILQRIERHQVQTIGQVGSQLLWPVKRAQSLSLLA
HFCQVCLPLFGQFQDAMTTDHDSKWSLYHSRISFSLNSKLLSPKEVIDAALSAYQASSHRDSSSNKPNIDIAQVEGFVRQ
ILGWREYIRAVYWANMPAYANKNHYSADNNLPHYFWDGQTKMNCMKHAIDQSLEFAYAHHIQRLMITGNFCLITGIDPDQ
VDNWYLGIYVDAIEWVEMPNTRGMALFADGGIVGTKPYSASGSYINRMSDYCKGCHYKIKERSGEQSCPFNSLYWRFMNL
HRDALNRNPRMGMLYRSWDNMDEQSQQAILDTAEQRITNLENL
>Mature_523_residues
MNFKTVRLVLGDQLNIEHSWFRQVNDDVIYIIAELKQETDYVASHIQKVAAFFCAMGYFADGLKEQGHQVLHLTLDDTTQ
FENLDKLLKHYVHEFGAEKFEYQRPDEYRLLEQMNKLKLTNATKGCCDTEHFLLPFEEIEQQFPKDKHIMMEHFYRRMRK
RFDILLEDGKPVGGKWNYDANNRKKLKKQDIENLPQPLMFTNDITDILQRIERHQVQTIGQVGSQLLWPVKRAQSLSLLA
HFCQVCLPLFGQFQDAMTTDHDSKWSLYHSRISFSLNSKLLSPKEVIDAALSAYQASSHRDSSSNKPNIDIAQVEGFVRQ
ILGWREYIRAVYWANMPAYANKNHYSADNNLPHYFWDGQTKMNCMKHAIDQSLEFAYAHHIQRLMITGNFCLITGIDPDQ
VDNWYLGIYVDAIEWVEMPNTRGMALFADGGIVGTKPYSASGSYINRMSDYCKGCHYKIKERSGEQSCPFNSLYWRFMNL
HRDALNRNPRMGMLYRSWDNMDEQSQQAILDTAEQRITNLENL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61129; Mature: 61129

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKTVRLVLGDQLNIEHSWFRQVNDDVIYIIAELKQETDYVASHIQKVAAFFCAMGYFA
CCCEEEEEEECCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLKEQGHQVLHLTLDDTTQFENLDKLLKHYVHEFGAEKFEYQRPDEYRLLEQMNKLKLT
HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEC
NATKGCCDTEHFLLPFEEIEQQFPKDKHIMMEHFYRRMRKRFDILLEDGKPVGGKWNYDA
CCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
NNRKKLKKQDIENLPQPLMFTNDITDILQRIERHQVQTIGQVGSQLLWPVKRAQSLSLLA
CCHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFCQVCLPLFGQFQDAMTTDHDSKWSLYHSRISFSLNSKLLSPKEVIDAALSAYQASSHR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCC
DSSSNKPNIDIAQVEGFVRQILGWREYIRAVYWANMPAYANKNHYSADNNLPHYFWDGQT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCH
KMNCMKHAIDQSLEFAYAHHIQRLMITGNFCLITGIDPDQVDNWYLGIYVDAIEWVEMPN
HHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCHHHCCCEEEEEEEEHHHHHCCCC
TRGMALFADGGIVGTKPYSASGSYINRMSDYCKGCHYKIKERSGEQSCPFNSLYWRFMNL
CCCEEEEECCCEECCCCCCCCCHHHHHHHHHHCCCCEEHHCCCCCCCCCHHHHHHHHHHH
HRDALNRNPRMGMLYRSWDNMDEQSQQAILDTAEQRITNLENL
HHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFKTVRLVLGDQLNIEHSWFRQVNDDVIYIIAELKQETDYVASHIQKVAAFFCAMGYFA
CCCEEEEEEECCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLKEQGHQVLHLTLDDTTQFENLDKLLKHYVHEFGAEKFEYQRPDEYRLLEQMNKLKLT
HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEC
NATKGCCDTEHFLLPFEEIEQQFPKDKHIMMEHFYRRMRKRFDILLEDGKPVGGKWNYDA
CCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
NNRKKLKKQDIENLPQPLMFTNDITDILQRIERHQVQTIGQVGSQLLWPVKRAQSLSLLA
CCHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFCQVCLPLFGQFQDAMTTDHDSKWSLYHSRISFSLNSKLLSPKEVIDAALSAYQASSHR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCC
DSSSNKPNIDIAQVEGFVRQILGWREYIRAVYWANMPAYANKNHYSADNNLPHYFWDGQT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCH
KMNCMKHAIDQSLEFAYAHHIQRLMITGNFCLITGIDPDQVDNWYLGIYVDAIEWVEMPN
HHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCHHHCCCEEEEEEEEHHHHHCCCC
TRGMALFADGGIVGTKPYSASGSYINRMSDYCKGCHYKIKERSGEQSCPFNSLYWRFMNL
CCCEEEEECCCEECCCCCCCCCHHHHHHHHHHCCCCEEHHCCCCCCCCCHHHHHHHHHHH
HRDALNRNPRMGMLYRSWDNMDEQSQQAILDTAEQRITNLENL
HHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA