Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709549

Identifier: 218709549

GI number: 218709549

Start: 1690398

End: 1691144

Strand: Reverse

Name: 218709549

Synonym: VS_1558

Alternate gene names: NA

Gene position: 1691144-1690398 (Counterclockwise)

Preceding gene: 218709550

Following gene: 218709548

Centisome position: 51.26

GC content: 40.16

Gene sequence:

>747_bases
TTGAAAACTGGAGTAACTATAAGCCTAGCTCAAGTCCCTGTCACTAGAGGTGAGGTGTGTGCAAACCTTGAACGTCACCT
CAAAATGATTGAGCAATCATATTATTATGATGCAGATGTAGTTGTTTTCCCTGAATTATCATTGACTGGCTATGAGTTGG
ACTTAGCTGCTGAGCTAGCTTTTTCTCCAAGTCCATCGAACTTCAAAGAATTATCTCAAGCTTCGGTCGAAAATGAGATT
ATCACTATAGCTGGGTGCCCATTAAAAGTTAACAATGACTCAAAGCCAACAATAGGTGCTGTCATTTGCTTTCCTGATGG
CACTGTCCAATTTTACTCGAAACAACATTTGCATGAAGGAGAAGGGACGTATTGCTCATTCGGTTTGTCAGACTACTTTT
TTAAAGTAAATGGACATCAAATAGCGCTGGCTATTTGCGCGGACTTTACGGAATTGGAACATTCTCGACGGGCTAAAAAA
TTGGGCTCAGATATCTATGTTGTCAGTGCTCTTATTTCTAAAAATGGATTTGAACCTGACTCTAAGATTTTATCGGAAAT
CGCATCAGAGCAAGGTTTCCCTGTACTCTTAAGTAACCATATTTCAGTGACAGGCGGTTGGGAAACTTGCGGCAAGAGTT
CAGTTTGGAATTCACACGGAGAGCTCGTAAATAACTCTAGTTCCAAAGAATATGGTTTGGTCTTGTGCAATATTATGGGC
AATGAGGTCGAGGTAAATCAAACATAA

Upstream 100 bases:

>100_bases
AGCAAACTCCATAGATAGAAGCGGCCAAGTCCAACAGGTATTTATCCATTGTGCTACGACAACGGATAAATACTTAAGCG
TTATGTTTTAAGGAGAAAAC

Downstream 100 bases:

>100_bases
CAAGCGCTTCAAGCTGATTCGCAACGCATGCCATTTTTGGTTCAAATTGGTTTAGTGTTTACGGTGCAATGCACTAAGTT
CGATTTCGTTGCTCACAGCT

Product: putative amidohydrolase

Products: NA

Alternate protein names: Hydrolase; Carbon-Nitrogen Hydrolase; Carbon-Nitrogen Family Hydrolase; Carbon-Nitrogen Hydrolase Family Protein; Carbon-Nitrogen Hydrolase Protein; Hydrolase Carbon-Nitrogen Family

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELAFSPSPSNFKELSQASVENEI
ITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEGEGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKK
LGSDIYVVSALISKNGFEPDSKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG
NEVEVNQT

Sequences:

>Translated_248_residues
MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELAFSPSPSNFKELSQASVENEI
ITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEGEGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKK
LGSDIYVVSALISKNGFEPDSKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG
NEVEVNQT
>Mature_248_residues
MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELAFSPSPSNFKELSQASVENEI
ITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEGEGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKK
LGSDIYVVSALISKNGFEPDSKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG
NEVEVNQT

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27072; Mature: 27072

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELA
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCEEEEEEEEEE
FSPSPSNFKELSQASVENEIITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEG
ECCCCCHHHHHHHHHHCCCEEEEECCEEEECCCCCCCEEEEEECCCCCEEEHHHHHCCCC
EGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKKLGSDIYVVSALISKNGFEPD
CCCEEEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCH
SKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG
HHHHHHHHHCCCCEEEEECCEEEECCHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEECC
NEVEVNQT
CEEEECCC
>Mature Secondary Structure
MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELA
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCEEEEEEEEEE
FSPSPSNFKELSQASVENEIITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEG
ECCCCCHHHHHHHHHHCCCEEEEECCEEEECCCCCCCEEEEEECCCCCEEEHHHHHCCCC
EGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKKLGSDIYVVSALISKNGFEPD
CCCEEEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCH
SKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG
HHHHHHHHHCCCCEEEEECCEEEECCHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEECC
NEVEVNQT
CEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA