| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is tuaA [H]
Identifier: 218709526
GI number: 218709526
Start: 1672765
End: 1673424
Strand: Direct
Name: tuaA [H]
Synonym: VS_1535
Alternate gene names: 218709526
Gene position: 1672765-1673424 (Clockwise)
Preceding gene: 218709525
Following gene: 218709528
Centisome position: 50.7
GC content: 43.79
Gene sequence:
>660_bases ATGATGAATATTGAACAGCTATCTACCCAAAACTTATACCAATACAAAATCTCTCGTGCTAAACGTACTTTCGATTTCGT GAGTTCACTGATTGCTTTGATTTTGCTCGCGCCAGTATTTCCATTGATTGCGATCGCTATTGTACTCACTTCTCGTGGCC CGATTTTCTACCGTCAGCTGCGTGTTGGTAAATCGACACCGGAGAAAATGGAAATCTTTGAGATCATGAAATTCCGTAGT ATGTACGAAGATGCAGAAACGCGTTCTGGTGCTGTTTGGGCTACGGCGAATGACCCTCGAATCACACCCGTTGGCCGATT TTTGAGAAAGACGCGTCTTGATGAGTTGCCACAACTGATCAATGTATTGAAAGGTGAGATGTCTCTAATTGGCCCACGTC CTGAACGCCCTACTTTTTACACCAAACTAGAGAACGAAATCCCCTACTTTGCTGACCGCACATACGGCGTAATGCCCGGT ATTACGGGACTAGCACAAGTAAATCAAGGTTATGATACCTGTATTGATGATGTACGTCGTAAAGTGGGCTTTGACCACAG TTATGCACTGAGTCTGTGCTCTATGAAATCTTGGATTGTGGCTGATCTCAGCATCATTTCTAAAACAATCATAGTAATGG TCGATGGACGTGGACAATAG
Upstream 100 bases:
>100_bases TTTGATAGTTGGACACTATGCCAACTTCATTGGTGGCATTCGTTACCTAATCGGGCTAGAAAACTCACCTTGGACACGAG CGAATCATTAAGGACTTATT
Downstream 100 bases:
>100_bases GTGAGATGTGTTCGCGGTGATGGATGTTTTTTTATAGTCTACTTAAGGATATGTAACTCTTGACGCTTGATAGAAAGTGG CGACCAAATTGCTTAACAAT
Product: putative sugar transferase
Products: NA
Alternate protein names: Teichuronic acid biosynthesis protein TuaA; UDP-GalNAc:undecaprenyl-P GalNAc 1-P transferase [H]
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MMNIEQLSTQNLYQYKISRAKRTFDFVSSLIALILLAPVFPLIAIAIVLTSRGPIFYRQLRVGKSTPEKMEIFEIMKFRS MYEDAETRSGAVWATANDPRITPVGRFLRKTRLDELPQLINVLKGEMSLIGPRPERPTFYTKLENEIPYFADRTYGVMPG ITGLAQVNQGYDTCIDDVRRKVGFDHSYALSLCSMKSWIVADLSIISKTIIVMVDGRGQ
Sequences:
>Translated_219_residues MMNIEQLSTQNLYQYKISRAKRTFDFVSSLIALILLAPVFPLIAIAIVLTSRGPIFYRQLRVGKSTPEKMEIFEIMKFRS MYEDAETRSGAVWATANDPRITPVGRFLRKTRLDELPQLINVLKGEMSLIGPRPERPTFYTKLENEIPYFADRTYGVMPG ITGLAQVNQGYDTCIDDVRRKVGFDHSYALSLCSMKSWIVADLSIISKTIIVMVDGRGQ >Mature_219_residues MMNIEQLSTQNLYQYKISRAKRTFDFVSSLIALILLAPVFPLIAIAIVLTSRGPIFYRQLRVGKSTPEKMEIFEIMKFRS MYEDAETRSGAVWATANDPRITPVGRFLRKTRLDELPQLINVLKGEMSLIGPRPERPTFYTKLENEIPYFADRTYGVMPG ITGLAQVNQGYDTCIDDVRRKVGFDHSYALSLCSMKSWIVADLSIISKTIIVMVDGRGQ
Specific function: Might mediate the very first reaction in teichuronic synthesis, i.e., the formation of lipid-linked N- acetylglucosamine [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=193, Percent_Identity=39.3782383419689, Blast_Score=121, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 24896; Mature: 24896
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNIEQLSTQNLYQYKISRAKRTFDFVSSLIALILLAPVFPLIAIAIVLTSRGPIFYRQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RVGKSTPEKMEIFEIMKFRSMYEDAETRSGAVWATANDPRITPVGRFLRKTRLDELPQLI HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH NVLKGEMSLIGPRPERPTFYTKLENEIPYFADRTYGVMPGITGLAQVNQGYDTCIDDVRR HHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHH KVGFDHSYALSLCSMKSWIVADLSIISKTIIVMVDGRGQ HHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC >Mature Secondary Structure MMNIEQLSTQNLYQYKISRAKRTFDFVSSLIALILLAPVFPLIAIAIVLTSRGPIFYRQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RVGKSTPEKMEIFEIMKFRSMYEDAETRSGAVWATANDPRITPVGRFLRKTRLDELPQLI HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH NVLKGEMSLIGPRPERPTFYTKLENEIPYFADRTYGVMPGITGLAQVNQGYDTCIDDVRR HHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHH KVGFDHSYALSLCSMKSWIVADLSIISKTIIVMVDGRGQ HHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10048024; 9384377 [H]