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The map label for this gene is 218709520

Identifier: 218709520

GI number: 218709520

Start: 1665313

End: 1666689

Strand: Direct

Name: 218709520

Synonym: VS_1529

Alternate gene names: NA

Gene position: 1665313-1666689 (Clockwise)

Preceding gene: 218709519

Following gene: 218709521

Centisome position: 50.47

GC content: 45.9

Gene sequence:

>1377_bases
ATGCTCACCCCTGAAGCCAATAGATTGCCAGTCATCATCACTATCAGCACCTTGTGTGTTGGGCTTGGTATTGTTTGGTA
CTTTGTGCCTCACCCTGCTGTTATTGTAGCGCTCGCTCTTGTGCCATTAGCTGGGTTATTCGTGTTAAACAAGACATTCT
GGCTAGTTCTACTGTTCGTTGTCTTTTCATTTTTCCGAATTCACGAAGCCATACCTCAACTCTATTCGTTAAAAATACCG
CTGATGCTTTCATTAGGTGCCCTGTCAGCTTTACTCTGGCATGCACTAATCAGTAAAGAGCTAAAAATCTTCTGGCACCC
TTGTTTAAATTGGCTCGCCATATTTTGGGTATTGGTTTTCATTGGTATTATCTTCGCGTCTAACAGGCCCATAGCATTTG
CAGAATTCAAAGGTGTTTATTGGAAAATAATCGTCATGACGCTTGCGATTACTTGGTTAGTAAACACCACGGAAAATCTT
GCAAAAACCGCGATGACGATTATCTACGCAGGCGCTTTAGTCAGTTTTATTGCCGTGTACAACTCAGTAAATGGTATTGG
GCTTGTCGAGGGCTCACGCGTGACTATTGGCCGCGATTTTGGCTCTATGTTAGGTGACCCGAACGACCTAGCACTGGTAC
TGATGTTCCCACTCGCCTTTACAATAAGCCAAGCCACCACGACTGGCATCTCACGATCCAAGCGTTTAATCAGTGCCTTA
GTTTGTCTGTTACTGCTTGCCGCCATTATTGCCACTCAAAGCCGTGGCGGATTACTGGGTTGTATTGCGGTGATTGGTAT
TTTTGCGTGGAAGCTAGTGCGCTCTAAAGTCCTCTTAATCTCCGTAGGAACTGTCGCGGCCGTCGTGCTCTACTTGGTTG
CTGGGATCTCAGACAGGTCTTCTGGTGGTGCAGCTGAACAAGGCATCGATGAATCTGCAATGGGGCGAATCTATGCTTGG
GAAGCGGCAGTAAAAATGGCAGTTGAGAACCCACTGACCGGCGTAGGGTTGAACAACTTCTTCTCGAACTACTTCTTTTA
TAGTTCGCACTGGGACGGACTTAATCACGCCGTTCACAGTACCTGGTTTGGTGTGTTAGCAGAAACAGGCTTTATTGGTC
TGATCATTTTTGTCTGCCTTATCGTTTCTTTGATCAAAACCTCCCGATCCACACTCACCAGATTAAAAAACTCAACCACA
GAAATCGCACCTGAACTAAATGCGGTCGCGTATGCGATCTATGCAGGCCTGATTGGAACAATCGTGTCGGGTACATTTTT
GACTCAAGGCTTCAACTGGCCGATTTATATCCTCGCAGCGCTCACAGTTTGCGTCTCTAACGTATCTCAAACTGCCTGTC
AAAATGAGAAAACCTAA

Upstream 100 bases:

>100_bases
ACTCGCTTTGCAACCTTTAACATCACGCATTAGATACGACTTTCAAATGTATAACGATAGAGAGCTGCCATGAATAGTTT
ACTCAGCAATAGAGATTACA

Downstream 100 bases:

>100_bases
AGCCCACACTTTAACTCATTGAAAACATTATATTTATTAAATGGCACAGTATATGAAAGTACTTCTATATAACAAGATAG
AGGAGTTTCATTATGACGTC

Product: putative membrane protein of ExoQ family,involved in exopolysaccharide production

Products: NA

Alternate protein names: Lipid A Core; Polysaccharide Ligase; ExoQ Family Protein

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MLTPEANRLPVIITISTLCVGLGIVWYFVPHPAVIVALALVPLAGLFVLNKTFWLVLLFVVFSFFRIHEAIPQLYSLKIP
LMLSLGALSALLWHALISKELKIFWHPCLNWLAIFWVLVFIGIIFASNRPIAFAEFKGVYWKIIVMTLAITWLVNTTENL
AKTAMTIIYAGALVSFIAVYNSVNGIGLVEGSRVTIGRDFGSMLGDPNDLALVLMFPLAFTISQATTTGISRSKRLISAL
VCLLLLAAIIATQSRGGLLGCIAVIGIFAWKLVRSKVLLISVGTVAAVVLYLVAGISDRSSGGAAEQGIDESAMGRIYAW
EAAVKMAVENPLTGVGLNNFFSNYFFYSSHWDGLNHAVHSTWFGVLAETGFIGLIIFVCLIVSLIKTSRSTLTRLKNSTT
EIAPELNAVAYAIYAGLIGTIVSGTFLTQGFNWPIYILAALTVCVSNVSQTACQNEKT

Sequences:

>Translated_458_residues
MLTPEANRLPVIITISTLCVGLGIVWYFVPHPAVIVALALVPLAGLFVLNKTFWLVLLFVVFSFFRIHEAIPQLYSLKIP
LMLSLGALSALLWHALISKELKIFWHPCLNWLAIFWVLVFIGIIFASNRPIAFAEFKGVYWKIIVMTLAITWLVNTTENL
AKTAMTIIYAGALVSFIAVYNSVNGIGLVEGSRVTIGRDFGSMLGDPNDLALVLMFPLAFTISQATTTGISRSKRLISAL
VCLLLLAAIIATQSRGGLLGCIAVIGIFAWKLVRSKVLLISVGTVAAVVLYLVAGISDRSSGGAAEQGIDESAMGRIYAW
EAAVKMAVENPLTGVGLNNFFSNYFFYSSHWDGLNHAVHSTWFGVLAETGFIGLIIFVCLIVSLIKTSRSTLTRLKNSTT
EIAPELNAVAYAIYAGLIGTIVSGTFLTQGFNWPIYILAALTVCVSNVSQTACQNEKT
>Mature_458_residues
MLTPEANRLPVIITISTLCVGLGIVWYFVPHPAVIVALALVPLAGLFVLNKTFWLVLLFVVFSFFRIHEAIPQLYSLKIP
LMLSLGALSALLWHALISKELKIFWHPCLNWLAIFWVLVFIGIIFASNRPIAFAEFKGVYWKIIVMTLAITWLVNTTENL
AKTAMTIIYAGALVSFIAVYNSVNGIGLVEGSRVTIGRDFGSMLGDPNDLALVLMFPLAFTISQATTTGISRSKRLISAL
VCLLLLAAIIATQSRGGLLGCIAVIGIFAWKLVRSKVLLISVGTVAAVVLYLVAGISDRSSGGAAEQGIDESAMGRIYAW
EAAVKMAVENPLTGVGLNNFFSNYFFYSSHWDGLNHAVHSTWFGVLAETGFIGLIIFVCLIVSLIKTSRSTLTRLKNSTT
EIAPELNAVAYAIYAGLIGTIVSGTFLTQGFNWPIYILAALTVCVSNVSQTACQNEKT

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49694; Mature: 49694

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00888 CNMP_BINDING_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTPEANRLPVIITISTLCVGLGIVWYFVPHPAVIVALALVPLAGLFVLNKTFWLVLLFV
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSFFRIHEAIPQLYSLKIPLMLSLGALSALLWHALISKELKIFWHPCLNWLAIFWVLVF
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGIIFASNRPIAFAEFKGVYWKIIVMTLAITWLVNTTENLAKTAMTIIYAGALVSFIAVY
HHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
NSVNGIGLVEGSRVTIGRDFGSMLGDPNDLALVLMFPLAFTISQATTTGISRSKRLISAL
HCCCCCEEECCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCLLLLAAIIATQSRGGLLGCIAVIGIFAWKLVRSKVLLISVGTVAAVVLYLVAGISDRS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCC
SGGAAEQGIDESAMGRIYAWEAAVKMAVENPLTGVGLNNFFSNYFFYSSHWDGLNHAVHS
CCCCHHCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCEEECCCCCCHHHHHHH
TWFGVLAETGFIGLIIFVCLIVSLIKTSRSTLTRLKNSTTEIAPELNAVAYAIYAGLIGT
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHH
IVSGTFLTQGFNWPIYILAALTVCVSNVSQTACQNEKT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLTPEANRLPVIITISTLCVGLGIVWYFVPHPAVIVALALVPLAGLFVLNKTFWLVLLFV
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSFFRIHEAIPQLYSLKIPLMLSLGALSALLWHALISKELKIFWHPCLNWLAIFWVLVF
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGIIFASNRPIAFAEFKGVYWKIIVMTLAITWLVNTTENLAKTAMTIIYAGALVSFIAVY
HHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
NSVNGIGLVEGSRVTIGRDFGSMLGDPNDLALVLMFPLAFTISQATTTGISRSKRLISAL
HCCCCCEEECCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCLLLLAAIIATQSRGGLLGCIAVIGIFAWKLVRSKVLLISVGTVAAVVLYLVAGISDRS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCC
SGGAAEQGIDESAMGRIYAWEAAVKMAVENPLTGVGLNNFFSNYFFYSSHWDGLNHAVHS
CCCCHHCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCEEECCCCCCHHHHHHH
TWFGVLAETGFIGLIIFVCLIVSLIKTSRSTLTRLKNSTTEIAPELNAVAYAIYAGLIGT
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHH
IVSGTFLTQGFNWPIYILAALTVCVSNVSQTACQNEKT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA