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The map label for this gene is rfaB [C]

Identifier: 218709519

GI number: 218709519

Start: 1663947

End: 1665053

Strand: Direct

Name: rfaB [C]

Synonym: VS_1528

Alternate gene names: 218709519

Gene position: 1663947-1665053 (Clockwise)

Preceding gene: 218709518

Following gene: 218709520

Centisome position: 50.43

GC content: 44.63

Gene sequence:

>1107_bases
ATGAGTACAATCAAGCCTAGCCAAGGAGTACTCAACGTAAACCTTCACGAGATTTGGCTGTTGATCGACAGCCAAACTTT
TGGAGGCATAGAAACGCATGTTTTAGAGTTAGCACAAGGGCTGATATCTGAAAGCGCCCAGTATTCAGAGGCTATTCGAA
TCGTTCTTTTGACTAAGTTTAATCCTGAAGCGATCATCGTTGAAAAGTTGAATGCGCTGAACATCCCTTATAGTTACCTC
TCCGATTTAGCCTCATACTCTGCAGGTTCAAGCGGCAATAGCGCGACACAGCTTAAACGTGCAGCTCATCATTATGAGCC
AAGGCTTATCCATGCTCATGGTTACAAAGCCAGTTTGGTCAGCAAACTAATAAAGCTCCCACCTCGTTTTAACAACACCA
AACAAATCACCACTTATCATGCCGGTGAAACCCCAACAGGCAAAGTATGGCTTTATGACTGGCTCGACCGTTACAGCAGC
TTTCTTTCTGATCAGTCGCTCGTGGTCAGTGAGAAGATTAAAGCGAAAGTGCCGAGTAAAACCCATCAATTGAATAACTT
TGTTAAAGTCCCTACCAGATTAACAAAGTCCCCTTCATCAAGCCCATTCCATGTTGGCTTTGTGGGACGATTAAGCCACG
AAAAAGCGCCAGATCGATTTGTCGCATTAGCCAAACCGTTTCCTGATGTTCGGTTTGAGCTTTTTGGTGACGGGCCAGAA
ATGGAAGCGTTAGTTAAATCGCAGCCTGATAATGTTACCTTTCATGGGCATCAGACCAATATGGACGACGTCTGGAGCCA
AATCGATTTGTTAATCATCCCTTCCCGCTTTGAAGGCTTACCTATGGCGGCATTAGAAGCCATGATTCGCGGCATTCCTG
TCCTCGCCACCTCAGTTGGTAACTTGCCTAAACTCATCGAGCACCAAGTTAACGGCTACCTCGCCAATTCAGAAGCTGAA
CTAGAACAGTTTTTATCTTTGTGGATATCATTGTCGATTGAACAACGTGACTTTCTCAGAAGTAACGCGATAAAAACCGT
CAAAAACCAATATTCGCCACAAGCTGTTGTCCCGAAGTTGTTGGAAATCTACCAACTCGATCGTTAA

Upstream 100 bases:

>100_bases
GCCATCAATCATTGCGATGGGAATGTGTTAAACGCTGCCGTGCTGTTAGAACTTAGCCCTTCTACTGTTTATCGTAAGAA
ACAGGCTTGGGAATCGGAAG

Downstream 100 bases:

>100_bases
TCCTAGCCTTAGTAGATAACTGGTTATTTTAGCTTGATAATTTAGCCGTTCTAGTCAGTTTTATACTGATTCTCAAAATG
ACAAATCTCAACTTAAGATT

Product: putative glycosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Family Protein; Glycosyltransferase Group 1 Family Protein; Glycosyl Transferase Group 1/2 Family Protein; Hexosyltransferase; LPS Biosynthesis RfbU Related Protein; Mannosyltransferase MgtA; Glycosyltransferase CpsG; Group Glycosyltransferase; Group 1 Family Glycosyltransferase; LPS Biosynthesis Rfbu Related Protein; Sulfoquinovosyldiacylglycerol Biosynthesis Protein; Glycosytransferase; Glycosyltransferase-Like Protein; Galactosyltransferase WbgM; LPS Biosynthesis Related Glycosyltransferase; Transcriptional Regulator Fis Family; Glycosyltransferase Involved Exopolysaccharide Synthesis; Galactosyl Transferase; Glycosyl Transferase GT4 Family Protein; Fis Family Transcriptional Regulator; Capsular Polysaccharide Biosynthesis Protein; Glycosyl Transferase Domain-Containing Protein; Glucosyltransferase

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSTIKPSQGVLNVNLHEIWLLIDSQTFGGIETHVLELAQGLISESAQYSEAIRIVLLTKFNPEAIIVEKLNALNIPYSYL
SDLASYSAGSSGNSATQLKRAAHHYEPRLIHAHGYKASLVSKLIKLPPRFNNTKQITTYHAGETPTGKVWLYDWLDRYSS
FLSDQSLVVSEKIKAKVPSKTHQLNNFVKVPTRLTKSPSSSPFHVGFVGRLSHEKAPDRFVALAKPFPDVRFELFGDGPE
MEALVKSQPDNVTFHGHQTNMDDVWSQIDLLIIPSRFEGLPMAALEAMIRGIPVLATSVGNLPKLIEHQVNGYLANSEAE
LEQFLSLWISLSIEQRDFLRSNAIKTVKNQYSPQAVVPKLLEIYQLDR

Sequences:

>Translated_368_residues
MSTIKPSQGVLNVNLHEIWLLIDSQTFGGIETHVLELAQGLISESAQYSEAIRIVLLTKFNPEAIIVEKLNALNIPYSYL
SDLASYSAGSSGNSATQLKRAAHHYEPRLIHAHGYKASLVSKLIKLPPRFNNTKQITTYHAGETPTGKVWLYDWLDRYSS
FLSDQSLVVSEKIKAKVPSKTHQLNNFVKVPTRLTKSPSSSPFHVGFVGRLSHEKAPDRFVALAKPFPDVRFELFGDGPE
MEALVKSQPDNVTFHGHQTNMDDVWSQIDLLIIPSRFEGLPMAALEAMIRGIPVLATSVGNLPKLIEHQVNGYLANSEAE
LEQFLSLWISLSIEQRDFLRSNAIKTVKNQYSPQAVVPKLLEIYQLDR
>Mature_367_residues
STIKPSQGVLNVNLHEIWLLIDSQTFGGIETHVLELAQGLISESAQYSEAIRIVLLTKFNPEAIIVEKLNALNIPYSYLS
DLASYSAGSSGNSATQLKRAAHHYEPRLIHAHGYKASLVSKLIKLPPRFNNTKQITTYHAGETPTGKVWLYDWLDRYSSF
LSDQSLVVSEKIKAKVPSKTHQLNNFVKVPTRLTKSPSSSPFHVGFVGRLSHEKAPDRFVALAKPFPDVRFELFGDGPEM
EALVKSQPDNVTFHGHQTNMDDVWSQIDLLIIPSRFEGLPMAALEAMIRGIPVLATSVGNLPKLIEHQVNGYLANSEAEL
EQFLSLWISLSIEQRDFLRSNAIKTVKNQYSPQAVVPKLLEIYQLDR

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.1.- [C]

Molecular weight: Translated: 41169; Mature: 41037

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIKPSQGVLNVNLHEIWLLIDSQTFGGIETHVLELAQGLISESAQYSEAIRIVLLTKF
CCCCCCCCCEEEEEHEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHEEEEEEEEEC
NPEAIIVEKLNALNIPYSYLSDLASYSAGSSGNSATQLKRAAHHYEPRLIHAHGYKASLV
CCCEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHH
SKLIKLPPRFNNTKQITTYHAGETPTGKVWLYDWLDRYSSFLSDQSLVVSEKIKAKVPSK
HHHHHCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCEEHHHHHHHCCCCH
THQLNNFVKVPTRLTKSPSSSPFHVGFVGRLSHEKAPDRFVALAKPFPDVRFELFGDGPE
HHHHHHHEECCHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEEEECCCCC
MEALVKSQPDNVTFHGHQTNMDDVWSQIDLLIIPSRFEGLPMAALEAMIRGIPVLATSVG
HHHHHHCCCCCEEEECCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHCCC
NLPKLIEHQVNGYLANSEAELEQFLSLWISLSIEQRDFLRSNAIKTVKNQYSPQAVVPKL
CHHHHHHHHHCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LEIYQLDR
HHHHHCCC
>Mature Secondary Structure 
STIKPSQGVLNVNLHEIWLLIDSQTFGGIETHVLELAQGLISESAQYSEAIRIVLLTKF
CCCCCCCCEEEEEHEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHEEEEEEEEEC
NPEAIIVEKLNALNIPYSYLSDLASYSAGSSGNSATQLKRAAHHYEPRLIHAHGYKASLV
CCCEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHH
SKLIKLPPRFNNTKQITTYHAGETPTGKVWLYDWLDRYSSFLSDQSLVVSEKIKAKVPSK
HHHHHCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCEEHHHHHHHCCCCH
THQLNNFVKVPTRLTKSPSSSPFHVGFVGRLSHEKAPDRFVALAKPFPDVRFELFGDGPE
HHHHHHHEECCHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCEEEEECCCCC
MEALVKSQPDNVTFHGHQTNMDDVWSQIDLLIIPSRFEGLPMAALEAMIRGIPVLATSVG
HHHHHHCCCCCEEEECCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHCCC
NLPKLIEHQVNGYLANSEAELEQFLSLWISLSIEQRDFLRSNAIKTVKNQYSPQAVVPKL
CHHHHHHHHHCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LEIYQLDR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA