| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709486
Identifier: 218709486
GI number: 218709486
Start: 1627161
End: 1629506
Strand: Direct
Name: 218709486
Synonym: VS_1495
Alternate gene names: NA
Gene position: 1627161-1629506 (Clockwise)
Preceding gene: 218709483
Following gene: 218709487
Centisome position: 49.32
GC content: 45.44
Gene sequence:
>2346_bases ATGCGTTCACTATCGCGCTTCTTACTCCTCACTTTAGCCATTCTCTCATGGCCTAGTCATGCCAACTTGGAATATGACTT ACAATCTCAGCCGCAGGTATCCGATTCTGCTGTTGACCTCGATGCTCGAATTGATTCGTTACCCGATCCCCTCTTTATGG AGTCGTCGGACCGACGCCAAGTCAATATCTTGTTAGCTGAAGTTCTGCGAGTTCAAAAGCAGGAAATCAAAATCTTCGAG CAACAGATAAAAGCTTATAGAGATAACAACGACGTCGATCAATGGTTTGAGGTTCAAACCAGTTACGTCACTTTGAATAG CTTAAACGTCAGTAAACAACATCTTCTGGAACAGACGAGCTCTGCGAACAAAGAGCGCTTAACCGGTTTTGGCCCTTATG GTGTTACCCAGTTTAAGCAAGAATGGGAATTAACTAAGCTCAATATTGAGTATCTTGCATACTTCCAAATCCGAAGCTTC AAGGCGTTAGTTAACGATATCTTTATTTCGCCCGTACCTGTGATTGGTGCGTCGTTAAAAGTGTTGTTCATCTATTTCGG TTTAGTGTGGTGGCTTGCTAACAGCACTCGCTTAATTGAGTTGTTTCGAATTAACTTTCTTGAAGCGAAAACGAATCCTC CTTTCTTGGTTCGTGTCATTTGGTACATCAGCCGCGCTGAAATTGCGATTGCTTGGCTAATTGCCATCACATTGTCATTG AGAGTGCTTTCTAGTATCCCTAGTCTGCAACATTTGATTTTCCTGGAGATTTTCACGTGGTGGATTCTAGGTGGTTCGAT TGCCATCAGCTTTATTTTGGAATTTGCCTACCGTTTGGGTCGTACATCCAATCAAGAAGTGATCGCGCTGCGCCTATCGA CTATCCGCCGTTACGTGTGGAGCTTCATCGTAGCGGGTGTGATTCTGCAAATATCAAGTATTACGCTAGGCAAAGGCACG ATTTATAGTTGGATATATAGTGCTCTGTTTTTCTGGTTTGTATTGGTTACGGTTTCAGTGCTCAGGTTATGGAGGGCGAA GGTCTTCGATACACTTCAACACATTTCTGAACGTCCGGTATGGGTGAATTGGGCGGTAAACCGTAAGGGTACGTTCATAC TTAATATATTGGCGACAGCCATTGGTATCGTGTGGCTGAGCGTTTACAACTTCCAACACCGAATTATGGCCCTTCTGTCT AACTACACGCTGTTTAGCCAAGCTTTGGCGTATCTGTTTAGAATCGAAGTAGCTAAGCAGTCAGATCTCGATAAGAATCA GCAAAACTTGGTTCGAATCAAAGGCGATCAAACGTATGAATACATTCTGCCAGGTAATATAGACAGTACGTTAATTGACT ATGCCGGTGACGAGGTTAAGCAACTGTCTCGCTACTTGATGTCAGACAGCCCGGCTATCTGTATTGTTTCAGGTGAGCGT GGTGTGGGCGCGACAACGCTGCTTTATACCTTGCTGCACAAAGTATCTAACGCTGAGCCCGTATATGTAAGCTGCCCTTA CGCGGGTTACCAAGAGCTCTTAGCGCATTTAGCCGTGAGCATCGGCTTAGAAGAAGAAGCAACTGAAATTCAAATATTAG CGCACCTTCGTAAGAGCAATACCACTTACCTTATCGCGATAGATAACGCTCAACGACTGGTGAAACCAATGGTTGGCGGT CTGTCTGATTTGATTCGTTTGACCAACCTTCTGCGTCGTTCTAAAAAGAACCACCGTGTCGTGATATCGATCGCCAAATC AAGTTGGCGATTTGTGGATAGAGCGCGTGGTGAGCGTCTGCTGTTTGATTTGGTGTGCTTCCTTCCGCGTTGGACAGAGA AACAAGTGGGTGAACTTCTAAATAGCCGTATCAATACGGAGCTTGAGAAGCCGCTGTCTTTTGATGGCTTAGTGGTCCCT AAGCAATGGGACCAAGATGACATGAGCGAGGAAGACCGCGCACGCCAAGGTTTCTATCGAATTTTGTGGCACTACTCTGA TGGCAACCCTACCGTTGCGCTGCGTTTCTTCCGACTCTCTTTGAACCGAAATAAAGAGACAGATCAAGCGGTAGTACGTT TATTCCATGTCCCTGAAGCGCAGGAACTAGAGAATATGCCGAAACCTATGTTGGCTGTACTTCGTTCTATCGTGCAACTG GAAATCGCTTCGCCGGAAGTGTTGTCTGAATGTACACAGCTGAGCTCGGCAGAGATAACGGGGATTCTGCGTTACTTTGA AAGCCGGGGTTATATTGGTTGGCATGAAGAAAAGGCTCGAATTTCCGAGCACTGGTTCCGCCACATTACTAACGTTCTTG ATCGTCAACATCTACTGGTGAAGTAA
Upstream 100 bases:
>100_bases AAACAGGAATAAAGTACTCGCCCCCGATACGGGGTTGGATTTCACAAAGTAAGATTATCTAACTATAGTAATCCTAACCT CATAATTCTAAGAGACTTTT
Downstream 100 bases:
>100_bases AATGAAGAAGTTATTTATCCTACTATTTGTTGGCTTGGCAAGTGCTGTCAGTTTCCCGACCTTTGCGACGGAAGAGTTAG CCAACGTAGAAAGCATCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 781; Mature: 781
Protein sequence:
>781_residues MRSLSRFLLLTLAILSWPSHANLEYDLQSQPQVSDSAVDLDARIDSLPDPLFMESSDRRQVNILLAEVLRVQKQEIKIFE QQIKAYRDNNDVDQWFEVQTSYVTLNSLNVSKQHLLEQTSSANKERLTGFGPYGVTQFKQEWELTKLNIEYLAYFQIRSF KALVNDIFISPVPVIGASLKVLFIYFGLVWWLANSTRLIELFRINFLEAKTNPPFLVRVIWYISRAEIAIAWLIAITLSL RVLSSIPSLQHLIFLEIFTWWILGGSIAISFILEFAYRLGRTSNQEVIALRLSTIRRYVWSFIVAGVILQISSITLGKGT IYSWIYSALFFWFVLVTVSVLRLWRAKVFDTLQHISERPVWVNWAVNRKGTFILNILATAIGIVWLSVYNFQHRIMALLS NYTLFSQALAYLFRIEVAKQSDLDKNQQNLVRIKGDQTYEYILPGNIDSTLIDYAGDEVKQLSRYLMSDSPAICIVSGER GVGATTLLYTLLHKVSNAEPVYVSCPYAGYQELLAHLAVSIGLEEEATEIQILAHLRKSNTTYLIAIDNAQRLVKPMVGG LSDLIRLTNLLRRSKKNHRVVISIAKSSWRFVDRARGERLLFDLVCFLPRWTEKQVGELLNSRINTELEKPLSFDGLVVP KQWDQDDMSEEDRARQGFYRILWHYSDGNPTVALRFFRLSLNRNKETDQAVVRLFHVPEAQELENMPKPMLAVLRSIVQL EIASPEVLSECTQLSSAEITGILRYFESRGYIGWHEEKARISEHWFRHITNVLDRQHLLVK
Sequences:
>Translated_781_residues MRSLSRFLLLTLAILSWPSHANLEYDLQSQPQVSDSAVDLDARIDSLPDPLFMESSDRRQVNILLAEVLRVQKQEIKIFE QQIKAYRDNNDVDQWFEVQTSYVTLNSLNVSKQHLLEQTSSANKERLTGFGPYGVTQFKQEWELTKLNIEYLAYFQIRSF KALVNDIFISPVPVIGASLKVLFIYFGLVWWLANSTRLIELFRINFLEAKTNPPFLVRVIWYISRAEIAIAWLIAITLSL RVLSSIPSLQHLIFLEIFTWWILGGSIAISFILEFAYRLGRTSNQEVIALRLSTIRRYVWSFIVAGVILQISSITLGKGT IYSWIYSALFFWFVLVTVSVLRLWRAKVFDTLQHISERPVWVNWAVNRKGTFILNILATAIGIVWLSVYNFQHRIMALLS NYTLFSQALAYLFRIEVAKQSDLDKNQQNLVRIKGDQTYEYILPGNIDSTLIDYAGDEVKQLSRYLMSDSPAICIVSGER GVGATTLLYTLLHKVSNAEPVYVSCPYAGYQELLAHLAVSIGLEEEATEIQILAHLRKSNTTYLIAIDNAQRLVKPMVGG LSDLIRLTNLLRRSKKNHRVVISIAKSSWRFVDRARGERLLFDLVCFLPRWTEKQVGELLNSRINTELEKPLSFDGLVVP KQWDQDDMSEEDRARQGFYRILWHYSDGNPTVALRFFRLSLNRNKETDQAVVRLFHVPEAQELENMPKPMLAVLRSIVQL EIASPEVLSECTQLSSAEITGILRYFESRGYIGWHEEKARISEHWFRHITNVLDRQHLLVK >Mature_781_residues MRSLSRFLLLTLAILSWPSHANLEYDLQSQPQVSDSAVDLDARIDSLPDPLFMESSDRRQVNILLAEVLRVQKQEIKIFE QQIKAYRDNNDVDQWFEVQTSYVTLNSLNVSKQHLLEQTSSANKERLTGFGPYGVTQFKQEWELTKLNIEYLAYFQIRSF KALVNDIFISPVPVIGASLKVLFIYFGLVWWLANSTRLIELFRINFLEAKTNPPFLVRVIWYISRAEIAIAWLIAITLSL RVLSSIPSLQHLIFLEIFTWWILGGSIAISFILEFAYRLGRTSNQEVIALRLSTIRRYVWSFIVAGVILQISSITLGKGT IYSWIYSALFFWFVLVTVSVLRLWRAKVFDTLQHISERPVWVNWAVNRKGTFILNILATAIGIVWLSVYNFQHRIMALLS NYTLFSQALAYLFRIEVAKQSDLDKNQQNLVRIKGDQTYEYILPGNIDSTLIDYAGDEVKQLSRYLMSDSPAICIVSGER GVGATTLLYTLLHKVSNAEPVYVSCPYAGYQELLAHLAVSIGLEEEATEIQILAHLRKSNTTYLIAIDNAQRLVKPMVGG LSDLIRLTNLLRRSKKNHRVVISIAKSSWRFVDRARGERLLFDLVCFLPRWTEKQVGELLNSRINTELEKPLSFDGLVVP KQWDQDDMSEEDRARQGFYRILWHYSDGNPTVALRFFRLSLNRNKETDQAVVRLFHVPEAQELENMPKPMLAVLRSIVQL EIASPEVLSECTQLSSAEITGILRYFESRGYIGWHEEKARISEHWFRHITNVLDRQHLLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90082; Mature: 90082
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLSRFLLLTLAILSWPSHANLEYDLQSQPQVSDSAVDLDARIDSLPDPLFMESSDRRQ CCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCHH VNILLAEVLRVQKQEIKIFEQQIKAYRDNNDVDQWFEVQTSYVTLNSLNVSKQHLLEQTS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHH SANKERLTGFGPYGVTQFKQEWELTKLNIEYLAYFQIRSFKALVNDIFISPVPVIGASLK CCCHHHCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VLFIYFGLVWWLANSTRLIELFRINFLEAKTNPPFLVRVIWYISRAEIAIAWLIAITLSL HHHHHHHHHHHHCCCCCEEHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RVLSSIPSLQHLIFLEIFTWWILGGSIAISFILEFAYRLGRTSNQEVIALRLSTIRRYVW HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH SFIVAGVILQISSITLGKGTIYSWIYSALFFWFVLVTVSVLRLWRAKVFDTLQHISERPV HHHHHHHHHHHHCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE WVNWAVNRKGTFILNILATAIGIVWLSVYNFQHRIMALLSNYTLFSQALAYLFRIEVAKQ EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLDKNQQNLVRIKGDQTYEYILPGNIDSTLIDYAGDEVKQLSRYLMSDSPAICIVSGER CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCC GVGATTLLYTLLHKVSNAEPVYVSCPYAGYQELLAHLAVSIGLEEEATEIQILAHLRKSN CCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC TTYLIAIDNAQRLVKPMVGGLSDLIRLTNLLRRSKKNHRVVISIAKSSWRFVDRARGERL CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHH LFDLVCFLPRWTEKQVGELLNSRINTELEKPLSFDGLVVPKQWDQDDMSEEDRARQGFYR HHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCCCCCEECCCCCCCCCCCHHHHHHHCCEE ILWHYSDGNPTVALRFFRLSLNRNKETDQAVVRLFHVPEAQELENMPKPMLAVLRSIVQL EEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH EIASPEVLSECTQLSSAEITGILRYFESRGYIGWHEEKARISEHWFRHITNVLDRQHLLV HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCC K C >Mature Secondary Structure MRSLSRFLLLTLAILSWPSHANLEYDLQSQPQVSDSAVDLDARIDSLPDPLFMESSDRRQ CCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCHH VNILLAEVLRVQKQEIKIFEQQIKAYRDNNDVDQWFEVQTSYVTLNSLNVSKQHLLEQTS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHH SANKERLTGFGPYGVTQFKQEWELTKLNIEYLAYFQIRSFKALVNDIFISPVPVIGASLK CCCHHHCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VLFIYFGLVWWLANSTRLIELFRINFLEAKTNPPFLVRVIWYISRAEIAIAWLIAITLSL HHHHHHHHHHHHCCCCCEEHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RVLSSIPSLQHLIFLEIFTWWILGGSIAISFILEFAYRLGRTSNQEVIALRLSTIRRYVW HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH SFIVAGVILQISSITLGKGTIYSWIYSALFFWFVLVTVSVLRLWRAKVFDTLQHISERPV HHHHHHHHHHHHCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE WVNWAVNRKGTFILNILATAIGIVWLSVYNFQHRIMALLSNYTLFSQALAYLFRIEVAKQ EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLDKNQQNLVRIKGDQTYEYILPGNIDSTLIDYAGDEVKQLSRYLMSDSPAICIVSGER CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCC GVGATTLLYTLLHKVSNAEPVYVSCPYAGYQELLAHLAVSIGLEEEATEIQILAHLRKSN CCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC TTYLIAIDNAQRLVKPMVGGLSDLIRLTNLLRRSKKNHRVVISIAKSSWRFVDRARGERL CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCHHH LFDLVCFLPRWTEKQVGELLNSRINTELEKPLSFDGLVVPKQWDQDDMSEEDRARQGFYR HHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCCCCCEECCCCCCCCCCCHHHHHHHCCEE ILWHYSDGNPTVALRFFRLSLNRNKETDQAVVRLFHVPEAQELENMPKPMLAVLRSIVQL EEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH EIASPEVLSECTQLSSAEITGILRYFESRGYIGWHEEKARISEHWFRHITNVLDRQHLLV HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA