| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218709426
Identifier: 218709426
GI number: 218709426
Start: 1576233
End: 1576832
Strand: Reverse
Name: 218709426
Synonym: VS_1435
Alternate gene names: NA
Gene position: 1576832-1576233 (Counterclockwise)
Preceding gene: 218709435
Following gene: 218709425
Centisome position: 47.79
GC content: 41.33
Gene sequence:
>600_bases ATGAAAATCGGTATGGTTGCCCTATCACTATTCACCGCTTTTGGCATGAGTTCATACGCGATCGCTAATGAAAATGACAC AGCAGCTAAAGAGCTTGGTCATTTTTATGCAGGTGTAGATGTCGGATTTTACAATGAAACGGAATTAGAATACCGCGGTA GCAAAATTGAAGATTCTTCTGATCTAGCTGACTTGAGTTATAACTTAGTTGGCGGTTATGAGTTCAATACACACGATGTA GTAAAGCTGGGATTAGAAGCGGAGTACCGAAAAATTGGCAAAGTTAACTTTGCTCAAATGATGGATATGGAAGGCCAAGC CTTCTTCGTGAATGTTAAACCCAAATTCATCGTTAAAGGCGACATCTTGGATTTGTATGTCTCCCTGTTAGCAGGCGTTG GATCTATTGATACGGAAATCAAAGCCTTTGGGCTCTCAGCTTCTGAATCTGAGGCCGCTTACCAAATCGGTGGAGAATTT GGCGCAATAATTACCGATAACATCGACGTTCATATCGGTTACCGCTCTGCACATATTGAAATAGAGTCCATCGATGTTTC ATCCAAAACAGCATACATTGGTGCACGATACCATTTCTAA
Upstream 100 bases:
>100_bases CATAAAATCAGATGGTTACACAAAACCATTATTAGTTTAAAAGCTCTACATTTGGTAAGGTATTCAAGGAATCAATAACT TATTATATAAAAGGCTTAAT
Downstream 100 bases:
>100_bases AGTTCCTTCAATGGCTAGACCAATTTATTGCGGTCAACTAGCCTAACATGGCAAATAGTCCGATCTCTTTGAGGTCGGAT TTATCATTATTGGTTCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSSDLADLSYNLVGGYEFNTHDV VKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKGDILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEF GAIITDNIDVHIGYRSAHIEIESIDVSSKTAYIGARYHF
Sequences:
>Translated_199_residues MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSSDLADLSYNLVGGYEFNTHDV VKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKGDILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEF GAIITDNIDVHIGYRSAHIEIESIDVSSKTAYIGARYHF >Mature_199_residues MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSSDLADLSYNLVGGYEFNTHDV VKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKGDILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEF GAIITDNIDVHIGYRSAHIEIESIDVSSKTAYIGARYHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21766; Mature: 21766
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSS CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCC DLADLSYNLVGGYEFNTHDVVKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKG CHHHEEEEEEECEEECCCCEEEECCCHHHHHHCCCCHHHHHCCCCCEEEEECCCEEEEEC DILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEFGAIITDNIDVHIGYRSAHIE CHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEECCEEEEEEEEEEEEE IESIDVSSKTAYIGARYHF EEEECCCCCEEEEEEEECC >Mature Secondary Structure MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSS CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCC DLADLSYNLVGGYEFNTHDVVKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKG CHHHEEEEEEECEEECCCCEEEECCCHHHHHHCCCCHHHHHCCCCCEEEEECCCEEEEEC DILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEFGAIITDNIDVHIGYRSAHIE CHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEECCEEEEEEEEEEEEE IESIDVSSKTAYIGARYHF EEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA