Click here to switch to the map view.

The map label for this gene is 218709409

Identifier: 218709409

GI number: 218709409

Start: 1553135

End: 1553818

Strand: Direct

Name: 218709409

Synonym: VS_1418

Alternate gene names: NA

Gene position: 1553135-1553818 (Clockwise)

Preceding gene: 218709408

Following gene: 218709410

Centisome position: 47.07

GC content: 41.23

Gene sequence:

>684_bases
ATGAAATGGATTCTACTATTTTTATCTTGTTTAAGTTTTGTTGCTTTTGGGAGTGAGGTCGCTTCAAGCGAGCAGCAATC
AAAAAGTGACAGCAATCTATCTCATTTTGACCTTCCTTTACTGCTTGGTGATTGGTATTTGATGAACCCAGATCCTGAAC
AAGGTACTGAAAATTTTAGAGCGATAAAGCTAACCCTTGATTCAAATTATTCATTCTCCATTGATATTCAAAAGAAAGAC
TACAGTGTCGACCATTGGGAAGGCTTGTATAACGCCAATGAAGATACCATTATTTTAGGTTTAAACACCTCTGAACCTCA
AGTTTACGCCTATAGCAGTAACCATAATATGTTGAACCTCAACGGTGTCATGTTTACCAAAGCCTTACCGAATGCACTGG
CAGGTATTTGGTCGAGTGCTGAGCTTTCAGGTAGCGACCTGCGCGCGAGTAACATTCAAAAAATGGATTTAGTGCTTCAA
CCTGACTTTGTATTTATGTTCAGAGTGTCCGATGAAGTGGGGAGTGAGGTTGTTCGTCGTGGGGTGTATTACACAGAAGG
CGATCAATTGGTGCTTCTGTATGAAAATGGCGAGCACGGCACTCGTTACACATTAAACAGCGACGTCTTGACGCTTCAAG
GTGAAGAAGGCGACATGTTTGCAGTACTCAATCGTATTCGATAA

Upstream 100 bases:

>100_bases
CATTTAAGTTACTTTGCACTTAAAATTTAGTGACTTGGATCAAATTTTTTCGCTTTCTATTCATTACGTGCCTAAGCTTA
AAGAAAACGAGGGGGCGCGT

Downstream 100 bases:

>100_bases
TGACGAGTTGGATGCGCAAAGTCAGGCTTGTTGATAATATGGCTCACAGTTTATTTATTAGCCGTTCCTTTCTGATTTGG
TTGATAAAATAGCAAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKWILLFLSCLSFVAFGSEVASSEQQSKSDSNLSHFDLPLLLGDWYLMNPDPEQGTENFRAIKLTLDSNYSFSIDIQKKD
YSVDHWEGLYNANEDTIILGLNTSEPQVYAYSSNHNMLNLNGVMFTKALPNALAGIWSSAELSGSDLRASNIQKMDLVLQ
PDFVFMFRVSDEVGSEVVRRGVYYTEGDQLVLLYENGEHGTRYTLNSDVLTLQGEEGDMFAVLNRIR

Sequences:

>Translated_227_residues
MKWILLFLSCLSFVAFGSEVASSEQQSKSDSNLSHFDLPLLLGDWYLMNPDPEQGTENFRAIKLTLDSNYSFSIDIQKKD
YSVDHWEGLYNANEDTIILGLNTSEPQVYAYSSNHNMLNLNGVMFTKALPNALAGIWSSAELSGSDLRASNIQKMDLVLQ
PDFVFMFRVSDEVGSEVVRRGVYYTEGDQLVLLYENGEHGTRYTLNSDVLTLQGEEGDMFAVLNRIR
>Mature_227_residues
MKWILLFLSCLSFVAFGSEVASSEQQSKSDSNLSHFDLPLLLGDWYLMNPDPEQGTENFRAIKLTLDSNYSFSIDIQKKD
YSVDHWEGLYNANEDTIILGLNTSEPQVYAYSSNHNMLNLNGVMFTKALPNALAGIWSSAELSGSDLRASNIQKMDLVLQ
PDFVFMFRVSDEVGSEVVRRGVYYTEGDQLVLLYENGEHGTRYTLNSDVLTLQGEEGDMFAVLNRIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25608; Mature: 25608

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWILLFLSCLSFVAFGSEVASSEQQSKSDSNLSHFDLPLLLGDWYLMNPDPEQGTENFR
CHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCCEEECEEEECCEEEECCCCCCCCCCEE
AIKLTLDSNYSFSIDIQKKDYSVDHWEGLYNANEDTIILGLNTSEPQVYAYSSNHNMLNL
EEEEEECCCCEEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEE
NGVMFTKALPNALAGIWSSAELSGSDLRASNIQKMDLVLQPDFVFMFRVSDEVGSEVVRR
CCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHC
GVYYTEGDQLVLLYENGEHGTRYTLNSDVLTLQGEEGDMFAVLNRIR
CCEEECCCEEEEEEECCCCCCEEEECCCEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure
MKWILLFLSCLSFVAFGSEVASSEQQSKSDSNLSHFDLPLLLGDWYLMNPDPEQGTENFR
CHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCCEEECEEEECCEEEECCCCCCCCCCEE
AIKLTLDSNYSFSIDIQKKDYSVDHWEGLYNANEDTIILGLNTSEPQVYAYSSNHNMLNL
EEEEEECCCCEEEEEEECCCCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEE
NGVMFTKALPNALAGIWSSAELSGSDLRASNIQKMDLVLQPDFVFMFRVSDEVGSEVVRR
CCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHC
GVYYTEGDQLVLLYENGEHGTRYTLNSDVLTLQGEEGDMFAVLNRIR
CCEEECCCEEEEEEECCCCCCEEEECCCEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA