| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is maeA1 [H]
Identifier: 218709195
GI number: 218709195
Start: 1274115
End: 1275803
Strand: Reverse
Name: maeA1 [H]
Synonym: VS_1202
Alternate gene names: 218709195
Gene position: 1275803-1274115 (Counterclockwise)
Preceding gene: 218709198
Following gene: 218709194
Centisome position: 38.67
GC content: 47.19
Gene sequence:
>1689_bases ATGAACAACGATAAACGCCCTCTATATATCCCTTATGCTGGTCCTGCTCTACTAAGTACCCCTCTTCTAAACAAAGGCAG CGCATTCTCTGCTGAAGAGCGCAGTTCTTTCAACCTTGAAGGCTTGTTACCTGAAACGACCGAAACAATCCAAGAGCAAG TAGGACGTGCATACAAGCAATATTGTAACTTCGAAAGTGATATGGATAAGCATATCTACCTTCGTAACATCCAAGACACT AATGAAACGCTTTTTTATCGTTTAGTTCAAAACCACATTTCTGAAATGATGCCTATCATTTACACGCCAACAGTTGGCGC AGCATGTGAGAACTTCTCAAATATTTACCGTCGTGGCCGTGGTCTGTTTATCTCATACCCGAACCGCGATCGTATCGATG ACCTACTGAACAATGCGACAAACCACAACGTTAAAGTTATCGTGGTTACGGATGGTGAGCGTATTCTTGGTTTGGGAGAC CAAGGTATCGGTGGCATGGGTATTCCAATTGGTAAACTAGCACTTTACACAGCTTGTGGCGGCATCAGCCCAGCTTACAT GCTACCAATCGTGCTCGATGTGGGTACAAACAACCCGCAGCGTCTTGCAGACCCAATGTACATGGGCTGGCGTCACCCTC GTATCACGGGTGCTGATTACGATGCATTTGTTGAAGAATTCATTCAAGCCGTTCAACGCCGTTGGCCTGATGCATTAGTT CAGTTCGAAGATTTCGCACAAAAGAACGCAATGCCACTACTTGAACGCTACAAAGATCGCCTTTGTTGTTTCAACGATGA TATCCAAGGCACAGCCGCTGTAACGGTTGGTTCTCTACTTGCAGCATGTAAAGCAGCGAACAGCAAACTATCAGACCAAC GCATCACCTTCTTAGGTGCGGGTTCTGCAGGTTGTGGTATTGCTGAAGCTATCATTGCTCAAATGGTGTCTGAAGGTATC AGCGATGCACAAGCTCGCTCTCAAGTTTACATGGTTGACCGTTGGGGTCTGCTACAGGAAGGCATGCAAAACCTGCTTGA TTTCCAACAGCGTCTAGTTCAAACCAACGCGAACACCAAAGATTGGGAAAGCGATGGTACTGGTTTCTCTCTACTAGACG TTGTTCGTCACGCGAAACCTACGGTATTGGTTGGCGTATCTGGTGCGCCGGGTCTGTTCAGCAAAGAAGTCATCAAAGAG ATGAACCTGCACTGCGAACGCCCTATCGTGTTCCCACTGTCAAACCCAACAAGCCGTGTTGAAGCAACACCAAATGACAT TATTCGTTGGACTGACGGCCAAGCGCTTGTTGCGACTGGTAGCCCATTTGAGCCGGTGGTTCACAACGGCACCACTTACC CAATCGCTCAGTGTAATAACAGCTACATCTTCCCAGGTATTGGCCTTGGTGTATTGGCTGTGAATGCTTCACGCATCACT GACGAAATGCTAATGGAATCAAGCCGAGCACTTGCAACGTGTTCTCCACTTGCTATCAATGGCTCAGGTGCTCTACTTCC ACCATTGGAAGAGATCCACACCGTATCTAAGAAGATTGCTTTTGCCGTTGGTAAAAAAGCGATTGAGCAAGGTGTTGCTC TAGAGATCACTGAAGAAGCACTACAACAAGCGATAGACCAGCACTTCTGGCAGCCGGTTTACCGTCGCTACAAGCGTACT GCATTCTAA
Upstream 100 bases:
>100_bases ATATCATTTTGTTTGCAAAGATCGGAGGTAAACTATTTACAATTGAATAACTAAACCGTTATCATTTTTCGGTTACCCTT TCTCCCATATTAGGCATCTA
Downstream 100 bases:
>100_bases TAAACGTGCTGCGCTTGGAATAAAGAGCGTTAACTACTCTTACAAGAGCCTCTGCAACTGCGGGGGCTTTTTTCTTTACA CTGTCTTGTCTTTTTAACTG
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME 1 [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MNNDKRPLYIPYAGPALLSTPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVGRAYKQYCNFESDMDKHIYLRNIQDT NETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNATNHNVKVIVVTDGERILGLGD QGIGGMGIPIGKLALYTACGGISPAYMLPIVLDVGTNNPQRLADPMYMGWRHPRITGADYDAFVEEFIQAVQRRWPDALV QFEDFAQKNAMPLLERYKDRLCCFNDDIQGTAAVTVGSLLAACKAANSKLSDQRITFLGAGSAGCGIAEAIIAQMVSEGI SDAQARSQVYMVDRWGLLQEGMQNLLDFQQRLVQTNANTKDWESDGTGFSLLDVVRHAKPTVLVGVSGAPGLFSKEVIKE MNLHCERPIVFPLSNPTSRVEATPNDIIRWTDGQALVATGSPFEPVVHNGTTYPIAQCNNSYIFPGIGLGVLAVNASRIT DEMLMESSRALATCSPLAINGSGALLPPLEEIHTVSKKIAFAVGKKAIEQGVALEITEEALQQAIDQHFWQPVYRRYKRT AF
Sequences:
>Translated_562_residues MNNDKRPLYIPYAGPALLSTPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVGRAYKQYCNFESDMDKHIYLRNIQDT NETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNATNHNVKVIVVTDGERILGLGD QGIGGMGIPIGKLALYTACGGISPAYMLPIVLDVGTNNPQRLADPMYMGWRHPRITGADYDAFVEEFIQAVQRRWPDALV QFEDFAQKNAMPLLERYKDRLCCFNDDIQGTAAVTVGSLLAACKAANSKLSDQRITFLGAGSAGCGIAEAIIAQMVSEGI SDAQARSQVYMVDRWGLLQEGMQNLLDFQQRLVQTNANTKDWESDGTGFSLLDVVRHAKPTVLVGVSGAPGLFSKEVIKE MNLHCERPIVFPLSNPTSRVEATPNDIIRWTDGQALVATGSPFEPVVHNGTTYPIAQCNNSYIFPGIGLGVLAVNASRIT DEMLMESSRALATCSPLAINGSGALLPPLEEIHTVSKKIAFAVGKKAIEQGVALEITEEALQQAIDQHFWQPVYRRYKRT AF >Mature_562_residues MNNDKRPLYIPYAGPALLSTPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVGRAYKQYCNFESDMDKHIYLRNIQDT NETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNATNHNVKVIVVTDGERILGLGD QGIGGMGIPIGKLALYTACGGISPAYMLPIVLDVGTNNPQRLADPMYMGWRHPRITGADYDAFVEEFIQAVQRRWPDALV QFEDFAQKNAMPLLERYKDRLCCFNDDIQGTAAVTVGSLLAACKAANSKLSDQRITFLGAGSAGCGIAEAIIAQMVSEGI SDAQARSQVYMVDRWGLLQEGMQNLLDFQQRLVQTNANTKDWESDGTGFSLLDVVRHAKPTVLVGVSGAPGLFSKEVIKE MNLHCERPIVFPLSNPTSRVEATPNDIIRWTDGQALVATGSPFEPVVHNGTTYPIAQCNNSYIFPGIGLGVLAVNASRIT DEMLMESSRALATCSPLAINGSGALLPPLEEIHTVSKKIAFAVGKKAIEQGVALEITEEALQQAIDQHFWQPVYRRYKRT AF
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=522, Percent_Identity=44.4444444444444, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI62420882, Length=530, Percent_Identity=42.4528301886792, Blast_Score=438, Evalue=1e-123, Organism=Homo sapiens, GI62420880, Length=530, Percent_Identity=42.4528301886792, Blast_Score=438, Evalue=1e-123, Organism=Homo sapiens, GI239049447, Length=530, Percent_Identity=42.4528301886792, Blast_Score=438, Evalue=1e-123, Organism=Homo sapiens, GI4505145, Length=552, Percent_Identity=42.0289855072464, Blast_Score=424, Evalue=1e-118, Organism=Homo sapiens, GI270265879, Length=463, Percent_Identity=44.9244060475162, Blast_Score=390, Evalue=1e-108, Organism=Escherichia coli, GI87081919, Length=558, Percent_Identity=69.7132616487455, Blast_Score=800, Evalue=0.0, Organism=Caenorhabditis elegans, GI17537199, Length=546, Percent_Identity=43.040293040293, Blast_Score=419, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6322823, Length=566, Percent_Identity=44.5229681978799, Blast_Score=459, Evalue=1e-130, Organism=Drosophila melanogaster, GI281362674, Length=518, Percent_Identity=43.4362934362934, Blast_Score=432, Evalue=1e-121, Organism=Drosophila melanogaster, GI21356279, Length=518, Percent_Identity=43.4362934362934, Blast_Score=432, Evalue=1e-121, Organism=Drosophila melanogaster, GI281362672, Length=518, Percent_Identity=43.4362934362934, Blast_Score=432, Evalue=1e-121, Organism=Drosophila melanogaster, GI24646388, Length=513, Percent_Identity=41.5204678362573, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24646386, Length=513, Percent_Identity=41.5204678362573, Blast_Score=410, Evalue=1e-114, Organism=Drosophila melanogaster, GI78707242, Length=534, Percent_Identity=38.2022471910112, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI78707238, Length=534, Percent_Identity=38.2022471910112, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI78707240, Length=515, Percent_Identity=38.8349514563107, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI78707232, Length=509, Percent_Identity=37.524557956778, Blast_Score=372, Evalue=1e-103, Organism=Drosophila melanogaster, GI281363505, Length=511, Percent_Identity=37.1819960861057, Blast_Score=370, Evalue=1e-102, Organism=Drosophila melanogaster, GI78707236, Length=511, Percent_Identity=37.1819960861057, Blast_Score=370, Evalue=1e-102, Organism=Drosophila melanogaster, GI281363503, Length=509, Percent_Identity=36.9351669941061, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI19922384, Length=544, Percent_Identity=29.4117647058824, Blast_Score=250, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 61968; Mature: 61968
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00331 MALIC_ENZYMES ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNDKRPLYIPYAGPALLSTPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVGRAYKQ CCCCCCEEEEECCCHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHH YCNFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGR HCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHCCC GLFISYPNRDRIDDLLNNATNHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACG EEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHC GISPAYMLPIVLDVGTNNPQRLADPMYMGWRHPRITGADYDAFVEEFIQAVQRRWPDALV CCCHHHEEEEEEECCCCCHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH QFEDFAQKNAMPLLERYKDRLCCFNDDIQGTAAVTVGSLLAACKAANSKLSDQRITFLGA HHHHHHHHCCHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GSAGCGIAEAIIAQMVSEGISDAQARSQVYMVDRWGLLQEGMQNLLDFQQRLVQTNANTK CCCCCHHHHHHHHHHHHHCCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC DWESDGTGFSLLDVVRHAKPTVLVGVSGAPGLFSKEVIKEMNLHCERPIVFPLSNPTSRV CCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC EATPNDIIRWTDGQALVATGSPFEPVVHNGTTYPIAQCNNSYIFPGIGLGVLAVNASRIT CCCCCCCEEECCCCEEEECCCCCCCHHCCCCCCCCEECCCCEECCCCCCCCEEECHHHHH DEMLMESSRALATCSPLAINGSGALLPPLEEIHTVSKKIAFAVGKKAIEQGVALEITEEA HHHHHHCCCCCEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHH LQQAIDQHFWQPVYRRYKRTAF HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNDKRPLYIPYAGPALLSTPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVGRAYKQ CCCCCCEEEEECCCHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHH YCNFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGR HCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHCCC GLFISYPNRDRIDDLLNNATNHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACG EEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHC GISPAYMLPIVLDVGTNNPQRLADPMYMGWRHPRITGADYDAFVEEFIQAVQRRWPDALV CCCHHHEEEEEEECCCCCHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH QFEDFAQKNAMPLLERYKDRLCCFNDDIQGTAAVTVGSLLAACKAANSKLSDQRITFLGA HHHHHHHHCCHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GSAGCGIAEAIIAQMVSEGISDAQARSQVYMVDRWGLLQEGMQNLLDFQQRLVQTNANTK CCCCCHHHHHHHHHHHHHCCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC DWESDGTGFSLLDVVRHAKPTVLVGVSGAPGLFSKEVIKEMNLHCERPIVFPLSNPTSRV CCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC EATPNDIIRWTDGQALVATGSPFEPVVHNGTTYPIAQCNNSYIFPGIGLGVLAVNASRIT CCCCCCCEEECCCCEEEECCCCCCCHHCCCCCCCCEECCCCEECCCCCCCCEEECHHHHH DEMLMESSRALATCSPLAINGSGALLPPLEEIHTVSKKIAFAVGKKAIEQGVALEITEEA HHHHHHCCCCCEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHH LQQAIDQHFWQPVYRRYKRTAF HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA