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The map label for this gene is ygiQ [C]

Identifier: 218709134

GI number: 218709134

Start: 1208144

End: 1210522

Strand: Reverse

Name: ygiQ [C]

Synonym: VS_1141

Alternate gene names: 218709134

Gene position: 1210522-1208144 (Counterclockwise)

Preceding gene: 218709137

Following gene: 218709130

Centisome position: 36.69

GC content: 47.67

Gene sequence:

>2379_bases
ATGTACAGCGATATCACTCCTATTCACGAACACAAAAAATACTGGGCCGAGTGCTACGGAACTGCACCTTTTTTGCCTAC
CAGTAGAAAGGAGATGGATGCTCTTGGATGGGATAGCTGTGACATTATTATTGTAACTGGTGACGCTTATGTCGATCACC
CGAGCTTTGGCATGGCTATCATTGGTCGCCTTCTTGAAGCTCAAGGATTCCGCGTGGGCATTATTGCGCAACCAAAGTGG
GACAATAAAGACGCCTTCATGAAGCTAGGTAAACCTAACCTATTCTTCGGCATTACAGCGGGTAACATGGACTCCATGAT
CAACCGCTACACCTCTGATCGCAAATTACGTCACGATGATGCTTATACGCCAAACAACGAAGGTGGCAAGCGTCCTGACC
GTGCAACTCTAGTTTATTCCCAACGTTGTCGCGAAGCCTACAAAGGCACGCCAATCGTTCTTGGTGGTATCGAAGCAAGT
TTGCGCCGTGTTGCTCACTACGACTACTGGTCAGATAAAGTTCGTCGCTCTGTATTGTTTGACGCAAAAGCAGATATTCT
TCTTTTTGGTAACGCTGAGCGTGCACTGGTTGAAGTGGCACACCGCATTGCCGATGGCGAAGACATGTCTACGCTGACCA
ATATCCGCGGTACTGCTATCAATCTTCCTACTGCCCCAGAAGGCTTCAAGATCATTGACTCTTCTCGTATCGAAAAGCCG
AACAAAGCGTACGTTCCGGTTAACCCTTACGAAGTTGAAACCCAGTGTGATACTAAGAAAGACGAAAAAGAAGAAATAAA
AGCGCAACCTATTACTATTCGTCCTTCTCGTCACGACGCAAAAACAACCGCGGTTCGTATCCCAGGTTACGAAAAGCTAA
ACAATGACCGTATTCTTTACGCTCACGCTAGCCGTATTCTGCACCTTGAGACAAACCCGTACTCAGGTCGTGCTCTGATT
CAACGTCACGGTGATCGCGAACTTTGGGTTAACCAAGCGCCGATTCCATTGACCACAGAAGAGATGGACTACGTGTTTGG
CCTTGCTTATAAGCGTGTTCCGCACCCTATGTACGGCAAAGCGAAAATCCCTGCATACGACATGATCAAAACCTCGGTTA
ACATCATGCGTGGTTGTTTTGGTGGCTGTTCTTTCTGTTCAATCACAGAGCACGAAGGTCGCATCATCCAGAACCGTTCG
AAAGAATCTATCTTGGATGAAATCGAAGACATTAAAGATAAAGTGCCGGGCTTCACCGGTACTATTTCTGATTTGGGCGG
CCCAACGGCGAACATGTACCGTTTAGGTTGTTCAGATCCTAAAGCAGAAATTAACTGTCGTCGTCCATCATGCGTGTTCC
CGAAAATCTGTGAAAAGCTAAACACAGACCATCAACACACCATCGACCTGTACCGCTCTGCGAGAAAAGTACCGGGCGTT
AAGAAGATCATGATCGCTTCTGGTGTACGTTACGACTTAGCGATTGAATCTCCAGAATACGTTCGTGAGCTTGTGACTCA
CCACGTTGGTGGTTACTTGAAGATTGCTCCAGAGCATACTGAAAAAGGCCCACTGGATCTGATGATGAAGCCGGGTATGG
GCACTTACGATCGTTTCAAAGAGATGTTCGAGAAATACAGCGCTGAAGCCGGTAAGAAACAGTACCTAATTCCTTACTTC
ATCTCTGCTCACCCGGGCACAGAAGATGAAGACATGCTTAACCTTGCAATGTGGCTGAAAAAGCACAACTACGAGTGTGA
CCAAGTACAGAACTTCTATCCATCGCCAATGTGTAATGCAACGTCGATGTACTACTCAGAGACCAACCCTCTGAAACGCG
TGAAATATAAGAAGCGTGAAGATGTTCCTGTACCGAAAGGTGATCGTCAACGTCGTCTGCATAAAGCGCTGCTTCGTTAC
CACGATCCTGAAAACTGGAAGATCATCCGTGAAGCGCTGATCAGCATGGGTAAAAAGCACCTAATTGGTGACAAAGCAAA
CTGTCTAGTACCAGAAGAAGATTTTGAAGCTCAGACACCGGCGCAGCGTCGTAAGTCTGGTCGTCACGGCTCACAGCGCT
TTGCGACTAAGCACAGTAAGTCTCAACCAGGTCTTGGTGGCGAAAGCCCACGTAACCATTCTAAGCCTGGCGGCAAGAAG
CCAACAGGTGGCCAAAACAACGGCAATCAAGGCAACGGAAAGCAGAACGGTAACGGCAATAAACCAGCGACTGGCTTCAT
TAAGAAAAGTCCAGGTGGTCAGCAATCGCAAGGTAATGGCGGCGGAAACGGCAAACCAAACCGTAACAAAGCGGGTAATG
GTCAAGGTGGTAAACCTGCGAGTAACGGTAAGAATCGCCAACGCGCAGCACAACGTTAA

Upstream 100 bases:

>100_bases
TAAAAATACGAAAGACATCAAAACTAACAGGGGCATGTTCTACTGGCTAGTCTAGGCTCATGCCGCTATAATTCCCGCCT
CAAAAATCAGAGGTTGAAAT

Downstream 100 bases:

>100_bases
GACAGCGACCCATTGACTTCGCTATGGTAAAAACACAAAGCGCAGCTATTTAGCTGCGCTTTTTTGTGCCCGTTACCAAT
GGCTAGCGGATTAGCCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 792; Mature: 792

Protein sequence:

>792_residues
MYSDITPIHEHKKYWAECYGTAPFLPTSRKEMDALGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPKW
DNKDAFMKLGKPNLFFGITAGNMDSMINRYTSDRKLRHDDAYTPNNEGGKRPDRATLVYSQRCREAYKGTPIVLGGIEAS
LRRVAHYDYWSDKVRRSVLFDAKADILLFGNAERALVEVAHRIADGEDMSTLTNIRGTAINLPTAPEGFKIIDSSRIEKP
NKAYVPVNPYEVETQCDTKKDEKEEIKAQPITIRPSRHDAKTTAVRIPGYEKLNNDRILYAHASRILHLETNPYSGRALI
QRHGDRELWVNQAPIPLTTEEMDYVFGLAYKRVPHPMYGKAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRS
KESILDEIEDIKDKVPGFTGTISDLGGPTANMYRLGCSDPKAEINCRRPSCVFPKICEKLNTDHQHTIDLYRSARKVPGV
KKIMIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEMFEKYSAEAGKKQYLIPYF
ISAHPGTEDEDMLNLAMWLKKHNYECDQVQNFYPSPMCNATSMYYSETNPLKRVKYKKREDVPVPKGDRQRRLHKALLRY
HDPENWKIIREALISMGKKHLIGDKANCLVPEEDFEAQTPAQRRKSGRHGSQRFATKHSKSQPGLGGESPRNHSKPGGKK
PTGGQNNGNQGNGKQNGNGNKPATGFIKKSPGGQQSQGNGGGNGKPNRNKAGNGQGGKPASNGKNRQRAAQR

Sequences:

>Translated_792_residues
MYSDITPIHEHKKYWAECYGTAPFLPTSRKEMDALGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPKW
DNKDAFMKLGKPNLFFGITAGNMDSMINRYTSDRKLRHDDAYTPNNEGGKRPDRATLVYSQRCREAYKGTPIVLGGIEAS
LRRVAHYDYWSDKVRRSVLFDAKADILLFGNAERALVEVAHRIADGEDMSTLTNIRGTAINLPTAPEGFKIIDSSRIEKP
NKAYVPVNPYEVETQCDTKKDEKEEIKAQPITIRPSRHDAKTTAVRIPGYEKLNNDRILYAHASRILHLETNPYSGRALI
QRHGDRELWVNQAPIPLTTEEMDYVFGLAYKRVPHPMYGKAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRS
KESILDEIEDIKDKVPGFTGTISDLGGPTANMYRLGCSDPKAEINCRRPSCVFPKICEKLNTDHQHTIDLYRSARKVPGV
KKIMIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEMFEKYSAEAGKKQYLIPYF
ISAHPGTEDEDMLNLAMWLKKHNYECDQVQNFYPSPMCNATSMYYSETNPLKRVKYKKREDVPVPKGDRQRRLHKALLRY
HDPENWKIIREALISMGKKHLIGDKANCLVPEEDFEAQTPAQRRKSGRHGSQRFATKHSKSQPGLGGESPRNHSKPGGKK
PTGGQNNGNQGNGKQNGNGNKPATGFIKKSPGGQQSQGNGGGNGKPNRNKAGNGQGGKPASNGKNRQRAAQR
>Mature_792_residues
MYSDITPIHEHKKYWAECYGTAPFLPTSRKEMDALGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPKW
DNKDAFMKLGKPNLFFGITAGNMDSMINRYTSDRKLRHDDAYTPNNEGGKRPDRATLVYSQRCREAYKGTPIVLGGIEAS
LRRVAHYDYWSDKVRRSVLFDAKADILLFGNAERALVEVAHRIADGEDMSTLTNIRGTAINLPTAPEGFKIIDSSRIEKP
NKAYVPVNPYEVETQCDTKKDEKEEIKAQPITIRPSRHDAKTTAVRIPGYEKLNNDRILYAHASRILHLETNPYSGRALI
QRHGDRELWVNQAPIPLTTEEMDYVFGLAYKRVPHPMYGKAKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRS
KESILDEIEDIKDKVPGFTGTISDLGGPTANMYRLGCSDPKAEINCRRPSCVFPKICEKLNTDHQHTIDLYRSARKVPGV
KKIMIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEMFEKYSAEAGKKQYLIPYF
ISAHPGTEDEDMLNLAMWLKKHNYECDQVQNFYPSPMCNATSMYYSETNPLKRVKYKKREDVPVPKGDRQRRLHKALLRY
HDPENWKIIREALISMGKKHLIGDKANCLVPEEDFEAQTPAQRRKSGRHGSQRFATKHSKSQPGLGGESPRNHSKPGGKK
PTGGQNNGNQGNGKQNGNGNKPATGFIKKSPGGQQSQGNGGGNGKPNRNKAGNGQGGKPASNGKNRQRAAQR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=718, Percent_Identity=64.7632311977716, Blast_Score=982, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 88874; Mature: 88874

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSDITPIHEHKKYWAECYGTAPFLPTSRKEMDALGWDSCDIIIVTGDAYVDHPSFGMAI
CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCHHHHH
IGRLLEAQGFRVGIIAQPKWDNKDAFMKLGKPNLFFGITAGNMDSMINRYTSDRKLRHDD
HHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC
AYTPNNEGGKRPDRATLVYSQRCREAYKGTPIVLGGIEASLRRVAHYDYWSDKVRRSVLF
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHC
DAKADILLFGNAERALVEVAHRIADGEDMSTLTNIRGTAINLPTAPEGFKIIDSSRIEKP
CCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCCEEECHHHCCCC
NKAYVPVNPYEVETQCDTKKDEKEEIKAQPITIRPSRHDAKTTAVRIPGYEKLNNDRILY
CCEEECCCCEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCEEEEECCCHHHCCCCEEEE
AHASRILHLETNPYSGRALIQRHGDRELWVNQAPIPLTTEEMDYVFGLAYKRVPHPMYGK
EECCEEEEEECCCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
AKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSKESILDEIEDIKDKVPGFTG
CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCE
TISDLGGPTANMYRLGCSDPKAEINCRRPSCVFPKICEKLNTDHQHTIDLYRSARKVPGV
EHHHCCCCCCCEEEECCCCCCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCH
KKIMIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFK
HEEHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEECCCCCHHHHHH
EMFEKYSAEAGKKQYLIPYFISAHPGTEDEDMLNLAMWLKKHNYECDQVQNFYPSPMCNA
HHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
TSMYYSETNPLKRVKYKKREDVPVPKGDRQRRLHKALLRYHDPENWKIIREALISMGKKH
HHEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
LIGDKANCLVPEEDFEAQTPAQRRKSGRHGSQRFATKHSKSQPGLGGESPRNHSKPGGKK
HCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PTGGQNNGNQGNGKQNGNGNKPATGFIKKSPGGQQSQGNGGGNGKPNRNKAGNGQGGKPA
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SNGKNRQRAAQR
CCCCHHHHHHCC
>Mature Secondary Structure
MYSDITPIHEHKKYWAECYGTAPFLPTSRKEMDALGWDSCDIIIVTGDAYVDHPSFGMAI
CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCHHHHH
IGRLLEAQGFRVGIIAQPKWDNKDAFMKLGKPNLFFGITAGNMDSMINRYTSDRKLRHDD
HHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC
AYTPNNEGGKRPDRATLVYSQRCREAYKGTPIVLGGIEASLRRVAHYDYWSDKVRRSVLF
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHC
DAKADILLFGNAERALVEVAHRIADGEDMSTLTNIRGTAINLPTAPEGFKIIDSSRIEKP
CCCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCCEEECHHHCCCC
NKAYVPVNPYEVETQCDTKKDEKEEIKAQPITIRPSRHDAKTTAVRIPGYEKLNNDRILY
CCEEECCCCEEECCCCCCCCCHHHHHCCCCEEECCCCCCCCEEEEECCCHHHCCCCEEEE
AHASRILHLETNPYSGRALIQRHGDRELWVNQAPIPLTTEEMDYVFGLAYKRVPHPMYGK
EECCEEEEEECCCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
AKIPAYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSKESILDEIEDIKDKVPGFTG
CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCE
TISDLGGPTANMYRLGCSDPKAEINCRRPSCVFPKICEKLNTDHQHTIDLYRSARKVPGV
EHHHCCCCCCCEEEECCCCCCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCH
KKIMIASGVRYDLAIESPEYVRELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFK
HEEHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEECCCCCHHHHHH
EMFEKYSAEAGKKQYLIPYFISAHPGTEDEDMLNLAMWLKKHNYECDQVQNFYPSPMCNA
HHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
TSMYYSETNPLKRVKYKKREDVPVPKGDRQRRLHKALLRYHDPENWKIIREALISMGKKH
HHEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
LIGDKANCLVPEEDFEAQTPAQRRKSGRHGSQRFATKHSKSQPGLGGESPRNHSKPGGKK
HCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PTGGQNNGNQGNGKQNGNGNKPATGFIKKSPGGQQSQGNGGGNGKPNRNKAGNGQGGKPA
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SNGKNRQRAAQR
CCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]