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The map label for this gene is sxy [H]

Identifier: 218709081

GI number: 218709081

Start: 1145460

End: 1146050

Strand: Reverse

Name: sxy [H]

Synonym: VS_1087

Alternate gene names: 218709081

Gene position: 1146050-1145460 (Counterclockwise)

Preceding gene: 218709082

Following gene: 218709080

Centisome position: 34.74

GC content: 42.13

Gene sequence:

>591_bases
ATGGATAAACCGATACTAAAGGACTCAATGAAATTATTTGAGCCCCTAGGAAAAATTAAGTCACGCTCAATGTTTGGTGG
ATTCGGGCTTTTTGCTGATGACACTATGTTTGCCCTGGTTGTGAATGACCAGTTGCATATACGAGCTGACAAATGCACAA
CACAACAATTCGAACAACAAGGATTTCAACCGTACGTCTACAAAAAACGTGGTTTTCCTGTCGTTACTAAATATTTCGCT
TTACCTGAAGGCTTATGGCAAGACCAAGAGAAAATCTTGCAGCTTGCGACTACGTCTCTAGGTTTTGCTAAAGAAGAGAA
AGCTGAACAATCTTCTGCTAAACCAACTAGACTCAAAGATCTGCCTAACCTTCGACTCGCTACCGAGCGGATGTTGAAAA
AGGCAGGGATCGATTCTGTAGAACGTTTATATGAATCTGGCTCTGTAAACGCATTTAACGCCATCAAAGAATCGCATGCG
TCTTCTGTCAGTATTGAACTGTTATGGGCGCTAGAAGGCGCGATCAATGGTACACATTGGTCTGTTATACCGCAGCAACG
TCGTGAAGAGCTTATCAATCACGTCAATTAA

Upstream 100 bases:

>100_bases
TAGTAATTTACAGCCTATTGACAATTTAATTGCAACATTTTGCTAATCTCTCGGACCTGCTTATTTGGTGGCGTAGTTCA
AATACACCGAGATAAATAAC

Downstream 100 bases:

>100_bases
CATTGTCAGTGCAACTATATAGATAACTAAGCCGCATTTTTGCGGCTTTTTTTATATCTGGTGAAAGTTATTCTATGCTT
TGCCTGTCTATCTATACTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDKPILKDSMKLFEPLGKIKSRSMFGGFGLFADDTMFALVVNDQLHIRADKCTTQQFEQQGFQPYVYKKRGFPVVTKYFA
LPEGLWQDQEKILQLATTSLGFAKEEKAEQSSAKPTRLKDLPNLRLATERMLKKAGIDSVERLYESGSVNAFNAIKESHA
SSVSIELLWALEGAINGTHWSVIPQQRREELINHVN

Sequences:

>Translated_196_residues
MDKPILKDSMKLFEPLGKIKSRSMFGGFGLFADDTMFALVVNDQLHIRADKCTTQQFEQQGFQPYVYKKRGFPVVTKYFA
LPEGLWQDQEKILQLATTSLGFAKEEKAEQSSAKPTRLKDLPNLRLATERMLKKAGIDSVERLYESGSVNAFNAIKESHA
SSVSIELLWALEGAINGTHWSVIPQQRREELINHVN
>Mature_196_residues
MDKPILKDSMKLFEPLGKIKSRSMFGGFGLFADDTMFALVVNDQLHIRADKCTTQQFEQQGFQPYVYKKRGFPVVTKYFA
LPEGLWQDQEKILQLATTSLGFAKEEKAEQSSAKPTRLKDLPNLRLATERMLKKAGIDSVERLYESGSVNAFNAIKESHA
SSVSIELLWALEGAINGTHWSVIPQQRREELINHVN

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae DNA transformation protein tfoX [H]

Homologues:

Organism=Escherichia coli, GI1787193, Length=183, Percent_Identity=35.5191256830601, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 22206; Mature: 22206

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPILKDSMKLFEPLGKIKSRSMFGGFGLFADDTMFALVVNDQLHIRADKCTTQQFEQQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCEEEEHHHHHHHHHHHC
GFQPYVYKKRGFPVVTKYFALPEGLWQDQEKILQLATTSLGFAKEEKAEQSSAKPTRLKD
CCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHC
LPNLRLATERMLKKAGIDSVERLYESGSVNAFNAIKESHASSVSIELLWALEGAINGTHW
CCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEE
SVIPQQRREELINHVN
ECCCHHHHHHHHHCCC
>Mature Secondary Structure
MDKPILKDSMKLFEPLGKIKSRSMFGGFGLFADDTMFALVVNDQLHIRADKCTTQQFEQQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCEEEEHHHHHHHHHHHC
GFQPYVYKKRGFPVVTKYFALPEGLWQDQEKILQLATTSLGFAKEEKAEQSSAKPTRLKD
CCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHC
LPNLRLATERMLKKAGIDSVERLYESGSVNAFNAIKESHASSVSIELLWALEGAINGTHW
CCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEE
SVIPQQRREELINHVN
ECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]