| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yecA [C]
Identifier: 218708998
GI number: 218708998
Start: 1040735
End: 1041355
Strand: Direct
Name: yecA [C]
Synonym: VS_1004
Alternate gene names: 218708998
Gene position: 1040735-1041355 (Clockwise)
Preceding gene: 218708995
Following gene: 218709001
Centisome position: 31.54
GC content: 42.51
Gene sequence:
>621_bases ATGAAGTATCAATTATTGAGTCTTCCTGACTCAATTAACGACGTAACAGCCCAGTTTGTAGAAGGTGCTATATTTGCATC TAACCTTGCAACTAAACCTCTTGATCCAGAGGCTTGGTTACCTATAGCTATTCCTGAAACTGGTCAGGACTTCGTTCCTC AAGTCACCGAGCAAATTAATCGCCAACATAACCTCATTCAGCGAAGTGAATATTTGCTTACAGAAGTGCTTGATGCAGAT AATTTTGCTGAACAGCTAGCCGATTTTTCTGAAGGTTTTATGATGGTCTGGCCGACGATTGAAGAACAGTGGCAGGAAAC GTCAATCGCAGATGGCACATTACGCATGCTACAAGCAATGTTAACAACATTCATGCTGGCGATTGATGAAGAACAGACAA TCGAGCAAATGAAAGCAGCTGGATTAGAAACCCCGCCAACTTTGAATGATCTAGTCGGGCAAGTCGATTTGATGGTGACA GAAGTTGCGCTAGCAGCGGATGAAGCGATGCTCGGAAATAAATCTCAAAGTGTGAATCCGTTTAAGGGCATCGGCCGAAA TGATGTTTGCCCGTGTGAAAGTGGTAAAAAGTTTAAACAGTGCTGTGGTAAAAAATCTTAA
Upstream 100 bases:
>100_bases CTGGTAGGTGTAATTAATCATAGAGCTATACGAATAATTACTAATTGTTAGCCTTGTGGGTATAATGGAGACAACAGAAT TGACCGACTAGTGAAGTAAT
Downstream 100 bases:
>100_bases TTGCATTGTTAATAGATAATAAAAAGTCGACGTAATGTCGACTTTTTCGTTTCTTAACATGATGTGCTAATTGTTAGTCA TTCTTCGATTTAACGAATTG
Product: preprotein translocase SecA subunit-like protein
Products: NA
Alternate protein names: Preprotein Translocase SecA Subunit-Like Protein; Preprotein Translocase SecA; Protein Export Cytoplasm Protein SecA ATPase RNA Helicase; Preprotein Translocase Subunit-Like Protein; SecA C-Motif Domain Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKYQLLSLPDSINDVTAQFVEGAIFASNLATKPLDPEAWLPIAIPETGQDFVPQVTEQINRQHNLIQRSEYLLTEVLDAD NFAEQLADFSEGFMMVWPTIEEQWQETSIADGTLRMLQAMLTTFMLAIDEEQTIEQMKAAGLETPPTLNDLVGQVDLMVT EVALAADEAMLGNKSQSVNPFKGIGRNDVCPCESGKKFKQCCGKKS
Sequences:
>Translated_206_residues MKYQLLSLPDSINDVTAQFVEGAIFASNLATKPLDPEAWLPIAIPETGQDFVPQVTEQINRQHNLIQRSEYLLTEVLDAD NFAEQLADFSEGFMMVWPTIEEQWQETSIADGTLRMLQAMLTTFMLAIDEEQTIEQMKAAGLETPPTLNDLVGQVDLMVT EVALAADEAMLGNKSQSVNPFKGIGRNDVCPCESGKKFKQCCGKKS >Mature_206_residues MKYQLLSLPDSINDVTAQFVEGAIFASNLATKPLDPEAWLPIAIPETGQDFVPQVTEQINRQHNLIQRSEYLLTEVLDAD NFAEQLADFSEGFMMVWPTIEEQWQETSIADGTLRMLQAMLTTFMLAIDEEQTIEQMKAAGLETPPTLNDLVGQVDLMVT EVALAADEAMLGNKSQSVNPFKGIGRNDVCPCESGKKFKQCCGKKS
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22834; Mature: 22834
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: PS00995 TCP1_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQLLSLPDSINDVTAQFVEGAIFASNLATKPLDPEAWLPIAIPETGQDFVPQVTEQIN CCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH RQHNLIQRSEYLLTEVLDADNFAEQLADFSEGFMMVWPTIEEQWQETSIADGTLRMLQAM HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCHHHHHHHHHH LTTFMLAIDEEQTIEQMKAAGLETPPTLNDLVGQVDLMVTEVALAADEAMLGNKSQSVNP HHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH FKGIGRNDVCPCESGKKFKQCCGKKS HHCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MKYQLLSLPDSINDVTAQFVEGAIFASNLATKPLDPEAWLPIAIPETGQDFVPQVTEQIN CCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH RQHNLIQRSEYLLTEVLDADNFAEQLADFSEGFMMVWPTIEEQWQETSIADGTLRMLQAM HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCHHHHHHHHHH LTTFMLAIDEEQTIEQMKAAGLETPPTLNDLVGQVDLMVTEVALAADEAMLGNKSQSVNP HHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH FKGIGRNDVCPCESGKKFKQCCGKKS HHCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA