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The map label for this gene is 218708994

Identifier: 218708994

GI number: 218708994

Start: 1036220

End: 1037185

Strand: Direct

Name: 218708994

Synonym: VS_1000

Alternate gene names: NA

Gene position: 1036220-1037185 (Clockwise)

Preceding gene: 218708993

Following gene: 218708995

Centisome position: 31.41

GC content: 46.17

Gene sequence:

>966_bases
ATGAGTTCTGTAAAAAAGGTATTGGCAGCGGTCGTAAGTTGTCTGTTGTTGCTATGGACAAGCAATGTCATGGCGAACGT
TGCCAAAGTTTCGGTTTCACAAGTTGTTGACCATCCAGATCTGAATGCAACACGTCTAGGACTTCTTGAAGGATTGAGAG
CAAAAGGTTACGAACCGGGTAAAAATTTAGAGTTTTCTTATGAAATGGCTGATGGCAATCCCGTTCAGGCAGCAAAAATA
GCCAGAGAGTTAGTTAGTGAGAACCCTCATGTATTAGTTGGCATCGCGACACCGACCTCTCAAGCGTTGGTTTCAGCGAC
TCGAACGATCCCGATTGTGTTCACCGCGGTGACAGACCCTATCGGAGCAAGACTTGTTAAACAATTGGAGCAGCCGGGAC
GAAATGTCACAGGCCTTTCTGACTTATCACCTATTTCCCAACATGTATCTCTTATTAAAGAGCTACTCCCCAATGCAGTT
TCAGTCGGTGTGGTTTATAACCCAGCAGAGGCAAATGCTGTTGCTTTAGTAGGGCTGTTAAAGCAGGCAACACGAGACTT
TGGCTTTACTTTGCATACTGAAAAAGCGTTGACCATCGATGATGTAGAAGAAAAAACAGCATCCGTGGCTAAGAAATCTG
ATGTTATCTACGCACTAACTGATAACACGGTGGCAAGCGGTATCGAAGGACTTATAAATGCTGCAAACCAAGCTGGCACA
CCCGTGGTTGCAGGAGCAACGTCTTATGTTGGCAAGGGAGCAATCGCTGGATTAGGTCTAGATTACTATGACGTCGGGGT
GCAGACCGCTGATTATGTGGCCGCTATTTTGAACGGACAAAAACCAGGGAAGTTGAGTGTTAAAACGGCTCAAAGCTCTC
AGTTGGTAGTTAACCTAGATGCCGCTCGTGAGCTTGGTTTGACGCTACCTAAGTCTGTGGTTGATCGCGCTATAGTCAGC
CGTTGA

Upstream 100 bases:

>100_bases
ATAACTTCAAGTCATCAATGGTTACTGGTAATAGTATCAATAGTGATGTTGTTCTCTTTGAGCGAGCAATAATGAGTAGA
GCTTGATTCAGGGAGCGATA

Downstream 100 bases:

>100_bases
TTAGTATTGACATCAAAAAAACAATGCTCAATAAGTCATTTTGTTAACAGGAATTTAAACCATCACAATGAACAACATTA
GTCGACTCTAACCATTAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Permease; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSSVKKVLAAVVSCLLLLWTSNVMANVAKVSVSQVVDHPDLNATRLGLLEGLRAKGYEPGKNLEFSYEMADGNPVQAAKI
ARELVSENPHVLVGIATPTSQALVSATRTIPIVFTAVTDPIGARLVKQLEQPGRNVTGLSDLSPISQHVSLIKELLPNAV
SVGVVYNPAEANAVALVGLLKQATRDFGFTLHTEKALTIDDVEEKTASVAKKSDVIYALTDNTVASGIEGLINAANQAGT
PVVAGATSYVGKGAIAGLGLDYYDVGVQTADYVAAILNGQKPGKLSVKTAQSSQLVVNLDAARELGLTLPKSVVDRAIVS
R

Sequences:

>Translated_321_residues
MSSVKKVLAAVVSCLLLLWTSNVMANVAKVSVSQVVDHPDLNATRLGLLEGLRAKGYEPGKNLEFSYEMADGNPVQAAKI
ARELVSENPHVLVGIATPTSQALVSATRTIPIVFTAVTDPIGARLVKQLEQPGRNVTGLSDLSPISQHVSLIKELLPNAV
SVGVVYNPAEANAVALVGLLKQATRDFGFTLHTEKALTIDDVEEKTASVAKKSDVIYALTDNTVASGIEGLINAANQAGT
PVVAGATSYVGKGAIAGLGLDYYDVGVQTADYVAAILNGQKPGKLSVKTAQSSQLVVNLDAARELGLTLPKSVVDRAIVS
R
>Mature_320_residues
SSVKKVLAAVVSCLLLLWTSNVMANVAKVSVSQVVDHPDLNATRLGLLEGLRAKGYEPGKNLEFSYEMADGNPVQAAKIA
RELVSENPHVLVGIATPTSQALVSATRTIPIVFTAVTDPIGARLVKQLEQPGRNVTGLSDLSPISQHVSLIKELLPNAVS
VGVVYNPAEANAVALVGLLKQATRDFGFTLHTEKALTIDDVEEKTASVAKKSDVIYALTDNTVASGIEGLINAANQAGTP
VVAGATSYVGKGAIAGLGLDYYDVGVQTADYVAAILNGQKPGKLSVKTAQSSQLVVNLDAARELGLTLPKSVVDRAIVSR

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33516; Mature: 33385

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVKKVLAAVVSCLLLLWTSNVMANVAKVSVSQVVDHPDLNATRLGLLEGLRAKGYEPG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
KNLEFSYEMADGNPVQAAKIARELVSENPHVLVGIATPTSQALVSATRTIPIVFTAVTDP
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCEEEEEEECCCH
IGARLVKQLEQPGRNVTGLSDLSPISQHVSLIKELLPNAVSVGVVYNPAEANAVALVGLL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHH
KQATRDFGFTLHTEKALTIDDVEEKTASVAKKSDVIYALTDNTVASGIEGLINAANQAGT
HHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCC
PVVAGATSYVGKGAIAGLGLDYYDVGVQTADYVAAILNGQKPGKLSVKTAQSSQLVVNLD
CEEECCHHHHCCCHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEC
AARELGLTLPKSVVDRAIVSR
HHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SSVKKVLAAVVSCLLLLWTSNVMANVAKVSVSQVVDHPDLNATRLGLLEGLRAKGYEPG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
KNLEFSYEMADGNPVQAAKIARELVSENPHVLVGIATPTSQALVSATRTIPIVFTAVTDP
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCEEEEEEECCCH
IGARLVKQLEQPGRNVTGLSDLSPISQHVSLIKELLPNAVSVGVVYNPAEANAVALVGLL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHH
KQATRDFGFTLHTEKALTIDDVEEKTASVAKKSDVIYALTDNTVASGIEGLINAANQAGT
HHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCC
PVVAGATSYVGKGAIAGLGLDYYDVGVQTADYVAAILNGQKPGKLSVKTAQSSQLVVNLD
CEEECCHHHHCCCHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEC
AARELGLTLPKSVVDRAIVSR
HHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA