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The map label for this gene is rnfG

Identifier: 218708969

GI number: 218708969

Start: 1006121

End: 1006750

Strand: Reverse

Name: rnfG

Synonym: VS_0973

Alternate gene names: 218708969

Gene position: 1006750-1006121 (Counterclockwise)

Preceding gene: 218708970

Following gene: 218708968

Centisome position: 30.51

GC content: 45.56

Gene sequence:

>630_bases
ATGCTAAATGCAATTAAGAAAAACGGCCTTGTACTCGCGATTTTTGCGTGTGCTTCGACGGGTTTGGTCGCGGTAACTCA
CTACCTGACCAAAGATCAGATCAAACAACAAGAACAGGCTCAGTTACTGTCTGTTCTTAACCAAGTGATCCCACACGATC
TGCACGACAACGAGCTGTTTTCGTCTTGTACTTTGGTTCAAGCAGAAGAGCTTGGTACTGAGCAAGCGATGCCGGCTTAC
ATTGCTAAAATCAATGGTGAGCCGAGTGCGATTGCGATCGAAGCGATTGCCCCTGACGGCTACAACGGTGCGATTAAAGT
GATTGTTGGAATGAAGATCGACGGTACTATTTTAGGTACTCGCGTGCTTTCTCACCAAGAAACTCCAGGTTTGGGTGATA
AGATTGATTTGCGTGTGAGTGATTGGATTCTCTCATTTGCTGGTAAGCAAGTGACGGATTCTAATCTTGACCGTTGGAAG
GTTCGTAAAGATGGTGGTGACTTTGACCAGTTCACTGGCGCAACCATTACGCCAAGAGCTGTCGTTAAGTCAGTGAAACA
AGCGGTGCAATACGTTAATCAAAACAACCAAGCATTGCTTGCTCAACCTCTAAATTGTGGTGGTGAATAA

Upstream 100 bases:

>100_bases
ATGGCGTGGCGTTTGCTGTATTGTTAGCCAACATGTGTGTTCCACTGATTGACTACTACACCAAACCTCGTACATACGGC
CACTAAAGGGAGCGGATACC

Downstream 100 bases:

>100_bases
TGAGTGACCATAAAACACTAATTAAAAATGGCATGTGGGCCAATAACCCTGCCCTAGTGCAACTCCTTGGCTTATGTCCG
CTGTTGGCTGTCTCTTCGAC

Product: electron transport complex protein RnfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MLNAIKKNGLVLAIFACASTGLVAVTHYLTKDQIKQQEQAQLLSVLNQVIPHDLHDNELFSSCTLVQAEELGTEQAMPAY
IAKINGEPSAIAIEAIAPDGYNGAIKVIVGMKIDGTILGTRVLSHQETPGLGDKIDLRVSDWILSFAGKQVTDSNLDRWK
VRKDGGDFDQFTGATITPRAVVKSVKQAVQYVNQNNQALLAQPLNCGGE

Sequences:

>Translated_209_residues
MLNAIKKNGLVLAIFACASTGLVAVTHYLTKDQIKQQEQAQLLSVLNQVIPHDLHDNELFSSCTLVQAEELGTEQAMPAY
IAKINGEPSAIAIEAIAPDGYNGAIKVIVGMKIDGTILGTRVLSHQETPGLGDKIDLRVSDWILSFAGKQVTDSNLDRWK
VRKDGGDFDQFTGATITPRAVVKSVKQAVQYVNQNNQALLAQPLNCGGE
>Mature_209_residues
MLNAIKKNGLVLAIFACASTGLVAVTHYLTKDQIKQQEQAQLLSVLNQVIPHDLHDNELFSSCTLVQAEELGTEQAMPAY
IAKINGEPSAIAIEAIAPDGYNGAIKVIVGMKIDGTILGTRVLSHQETPGLGDKIDLRVSDWILSFAGKQVTDSNLDRWK
VRKDGGDFDQFTGATITPRAVVKSVKQAVQYVNQNNQALLAQPLNCGGE

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family

Homologues:

Organism=Escherichia coli, GI1787918, Length=207, Percent_Identity=52.6570048309179, Blast_Score=214, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFG_VIBSL (B7VLT4)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002416590.1
- GeneID:   7160567
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_0973
- HOGENOM:   HBG454413
- OMA:   GMFDQFT
- GO:   GO:0006810
- HAMAP:   MF_00479
- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329
- SMART:   SM00900
- TIGRFAMs:   TIGR01947

Pfam domain/function: PF04205 FMN_bind

EC number: NA

Molecular weight: Translated: 22540; Mature: 22540

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x19cb8934)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNAIKKNGLVLAIFACASTGLVAVTHYLTKDQIKQQEQAQLLSVLNQVIPHDLHDNELF
CCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SSCTLVQAEELGTEQAMPAYIAKINGEPSAIAIEAIAPDGYNGAIKVIVGMKIDGTILGT
HHHHEEEHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEECCEEEHH
RVLSHQETPGLGDKIDLRVSDWILSFAGKQVTDSNLDRWKVRKDGGDFDQFTGATITPRA
HHHCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCHHH
VVKSVKQAVQYVNQNNQALLAQPLNCGGE
HHHHHHHHHHHHCCCCCEEEEECCCCCCH
>Mature Secondary Structure
MLNAIKKNGLVLAIFACASTGLVAVTHYLTKDQIKQQEQAQLLSVLNQVIPHDLHDNELF
CCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SSCTLVQAEELGTEQAMPAYIAKINGEPSAIAIEAIAPDGYNGAIKVIVGMKIDGTILGT
HHHHEEEHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEECCEEEHH
RVLSHQETPGLGDKIDLRVSDWILSFAGKQVTDSNLDRWKVRKDGGDFDQFTGATITPRA
HHHCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCHHH
VVKSVKQAVQYVNQNNQALLAQPLNCGGE
HHHHHHHHHHHHCCCCCEEEEECCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA