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The map label for this gene is ycgL [C]

Identifier: 218708884

GI number: 218708884

Start: 908428

End: 908718

Strand: Direct

Name: ycgL [C]

Synonym: VS_0884

Alternate gene names: 218708884

Gene position: 908428-908718 (Clockwise)

Preceding gene: 218708880

Following gene: 218708885

Centisome position: 27.53

GC content: 38.83

Gene sequence:

>291_bases
ATGCTGTGTTCTATATATAAAAGTTCAAAGAAAGAAGGAACATACCTTTATATCCCTAAGAAGGATGATTTCTCACAAGT
TCCTGACGCATTGATGCAAATGTTTGGTAAACCTAGTTTTGTAATGGTAATTAAAATGGATGGCCGTAAACTGGCGCAAG
TGAACATCGATAAAGTGAGAGAATCACTGAACACCGATGGTTTCTTTTTGCAGGTTCCGCCACCACCGGTTAATGAACTT
GAACTTCATAAAGAGCGTAAAGCTCAGCAAAACGTTCAAGACGAAGAGTGA

Upstream 100 bases:

>100_bases
TGTTGTCAAATGAACGTTTTGTTCCCAATATTTCCCTTAACATAAACTATTGATCTCGTAAGTGAGAGTTTTGTAGTCAT
AAACAATAAAAAGGTTTGTC

Downstream 100 bases:

>100_bases
TAGCTACCTTAATTCAAGGAGGAGTGATCGTTGAGTAAATTTTCGAAAACCATATTGGCTGTGTCGGCATTACTATTAGT
TAATAGCCTGACGATTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLCSIYKSSKKEGTYLYIPKKDDFSQVPDALMQMFGKPSFVMVIKMDGRKLAQVNIDKVRESLNTDGFFLQVPPPPVNEL
ELHKERKAQQNVQDEE

Sequences:

>Translated_96_residues
MLCSIYKSSKKEGTYLYIPKKDDFSQVPDALMQMFGKPSFVMVIKMDGRKLAQVNIDKVRESLNTDGFFLQVPPPPVNEL
ELHKERKAQQNVQDEE
>Mature_96_residues
MLCSIYKSSKKEGTYLYIPKKDDFSQVPDALMQMFGKPSFVMVIKMDGRKLAQVNIDKVRESLNTDGFFLQVPPPPVNEL
ELHKERKAQQNVQDEE

Specific function: Unknown

COG id: COG3100

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0745 family

Homologues:

Organism=Escherichia coli, GI308199518, Length=84, Percent_Identity=51.1904761904762, Blast_Score=98, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y884_VIBSL (B7VL66)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002416505.1
- ProteinModelPortal:   B7VL66
- SMR:   B7VL66
- GeneID:   7160482
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_0884
- HOGENOM:   HBG754037
- OMA:   KRICSIY
- ProtClustDB:   CLSK874615
- HAMAP:   MF_01866
- InterPro:   IPR007840
- ProDom:   PD030374

Pfam domain/function: PF05166 YcgL

EC number: NA

Molecular weight: Translated: 11078; Mature: 11078

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCSIYKSSKKEGTYLYIPKKDDFSQVPDALMQMFGKPSFVMVIKMDGRKLAQVNIDKVR
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECHHHHH
ESLNTDGFFLQVPPPPVNELELHKERKAQQNVQDEE
HHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLCSIYKSSKKEGTYLYIPKKDDFSQVPDALMQMFGKPSFVMVIKMDGRKLAQVNIDKVR
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECHHHHH
ESLNTDGFFLQVPPPPVNELELHKERKAQQNVQDEE
HHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA