| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is mltB [H]
Identifier: 218708885
GI number: 218708885
Start: 908749
End: 909747
Strand: Direct
Name: mltB [H]
Synonym: VS_0885
Alternate gene names: 218708885
Gene position: 908749-909747 (Clockwise)
Preceding gene: 218708884
Following gene: 218708886
Centisome position: 27.54
GC content: 44.74
Gene sequence:
>999_bases TTGAGTAAATTTTCGAAAACCATATTGGCTGTGTCGGCATTACTATTAGTTAATAGCCTGACGATTGGTTCCGTTCAGGC TGAAGAGCTGAGCTTTGAGCAATATGTAGAGAAACTAAAGCAACAAGGCCGGGCAGAAGGCATCTCTGAAACGATCATTG ATCAAGCCTTTGATGGTGTGACGTTTAAGCCAAGAGCGGTGAAAGCCGATAAGAATCAACCTGAGAAAAAACTGACTCTG GATGAATACATTCCACGCGCGGTTCCAGATTGGAAAGTGAAGCAGGCGAGATCGCTTTATAAGAAGCATTATTCAGCGTT GAAGCGCATTGGTGATGAATATGGTGTTCAACCAAGATTCATTGTCGCTCTATGGGGTGTTGAGAGTAACTTTGGTAAGT TCACGGGTAACTACAGTGTTATTGATGCTCTCACGACTATGGCCTATGAAGGACGTAGAGAAGCCTTCTTCCGTAGCGAA GCGATGGCGGCGTTGAAGATTCTTGATCAAGGCCATATTGCACCACAAGAGATGAAAGGCTCTTGGGCTGGTGCGATGGG ACAACCTCAGTTTATGCCAAGCTCATTCTTAGCTTATGCCGCTGACGGTAACGGCGATGGCAAGAAAGATATTTGGGGTA CTGAAGAAGATGTATTTGCTTCAGCGGCGAATTATCTCAGCCAGTCGGGTTGGGATGACAAATATACTTGGGGCCGTCAG GTTCACGTACCGTCGACTGTGTCTATTGAAATGCAAGGCCGAGGCGAAGACAAAGCGAAATACTTAAAAGAGTGGTCTGA ACTCGGTATTAAGCGCTTTGACGATCGCCCACTACCAACGCTTGATGAAGATATTAAAGCTTGGCTAATTATGCCAGACG ATGAAACTGGCCGTTCTTACCTCATTTACAACAACTACAATGTGTTAATGAAGTGGAATCGTTCTTATTACTTTGCGTTG GCAGTTAGCCACCTAGCAGACAGAATTAAGTTTGATTAA
Upstream 100 bases:
>100_bases ACCACCGGTTAATGAACTTGAACTTCATAAAGAGCGTAAAGCTCAGCAAAACGTTCAAGACGAAGAGTGATAGCTACCTT AATTCAAGGAGGAGTGATCG
Downstream 100 bases:
>100_bases TCGACCTAATTTGATTAATGGTCTTAATTTGGTTATTAGAGCTAATTTGGTTAACAGATTTAGGTCGCTTTGAATAGCAT TTGGCCTACCATAGGCAGAA
Product: putative lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSKFSKTILAVSALLLVNSLTIGSVQAEELSFEQYVEKLKQQGRAEGISETIIDQAFDGVTFKPRAVKADKNQPEKKLTL DEYIPRAVPDWKVKQARSLYKKHYSALKRIGDEYGVQPRFIVALWGVESNFGKFTGNYSVIDALTTMAYEGRREAFFRSE AMAALKILDQGHIAPQEMKGSWAGAMGQPQFMPSSFLAYAADGNGDGKKDIWGTEEDVFASAANYLSQSGWDDKYTWGRQ VHVPSTVSIEMQGRGEDKAKYLKEWSELGIKRFDDRPLPTLDEDIKAWLIMPDDETGRSYLIYNNYNVLMKWNRSYYFAL AVSHLADRIKFD
Sequences:
>Translated_332_residues MSKFSKTILAVSALLLVNSLTIGSVQAEELSFEQYVEKLKQQGRAEGISETIIDQAFDGVTFKPRAVKADKNQPEKKLTL DEYIPRAVPDWKVKQARSLYKKHYSALKRIGDEYGVQPRFIVALWGVESNFGKFTGNYSVIDALTTMAYEGRREAFFRSE AMAALKILDQGHIAPQEMKGSWAGAMGQPQFMPSSFLAYAADGNGDGKKDIWGTEEDVFASAANYLSQSGWDDKYTWGRQ VHVPSTVSIEMQGRGEDKAKYLKEWSELGIKRFDDRPLPTLDEDIKAWLIMPDDETGRSYLIYNNYNVLMKWNRSYYFAL AVSHLADRIKFD >Mature_331_residues SKFSKTILAVSALLLVNSLTIGSVQAEELSFEQYVEKLKQQGRAEGISETIIDQAFDGVTFKPRAVKADKNQPEKKLTLD EYIPRAVPDWKVKQARSLYKKHYSALKRIGDEYGVQPRFIVALWGVESNFGKFTGNYSVIDALTTMAYEGRREAFFRSEA MAALKILDQGHIAPQEMKGSWAGAMGQPQFMPSSFLAYAADGNGDGKKDIWGTEEDVFASAANYLSQSGWDDKYTWGRQV HVPSTVSIEMQGRGEDKAKYLKEWSELGIKRFDDRPLPTLDEDIKAWLIMPDDETGRSYLIYNNYNVLMKWNRSYYFALA VSHLADRIKFD
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=244, Percent_Identity=31.1475409836066, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 37658; Mature: 37527
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFSKTILAVSALLLVNSLTIGSVQAEELSFEQYVEKLKQQGRAEGISETIIDQAFDGV CCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC TFKPRAVKADKNQPEKKLTLDEYIPRAVPDWKVKQARSLYKKHYSALKRIGDEYGVQPRF CCCCCEECCCCCCCHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IVALWGVESNFGKFTGNYSVIDALTTMAYEGRREAFFRSEAMAALKILDQGHIAPQEMKG EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCC SWAGAMGQPQFMPSSFLAYAADGNGDGKKDIWGTEEDVFASAANYLSQSGWDDKYTWGRQ CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE VHVPSTVSIEMQGRGEDKAKYLKEWSELGIKRFDDRPLPTLDEDIKAWLIMPDDETGRSY EECCCEEEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCEE LIYNNYNVLMKWNRSYYFALAVSHLADRIKFD EEEECCEEEEEECCCEEEEHHHHHHHHHHCCC >Mature Secondary Structure SKFSKTILAVSALLLVNSLTIGSVQAEELSFEQYVEKLKQQGRAEGISETIIDQAFDGV CHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCC TFKPRAVKADKNQPEKKLTLDEYIPRAVPDWKVKQARSLYKKHYSALKRIGDEYGVQPRF CCCCCEECCCCCCCHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IVALWGVESNFGKFTGNYSVIDALTTMAYEGRREAFFRSEAMAALKILDQGHIAPQEMKG EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCC SWAGAMGQPQFMPSSFLAYAADGNGDGKKDIWGTEEDVFASAANYLSQSGWDDKYTWGRQ CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE VHVPSTVSIEMQGRGEDKAKYLKEWSELGIKRFDDRPLPTLDEDIKAWLIMPDDETGRSY EECCCEEEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCEE LIYNNYNVLMKWNRSYYFALAVSHLADRIKFD EEEECCEEEEEECCCEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]