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The map label for this gene is dsbE [H]

Identifier: 218708856

GI number: 218708856

Start: 876255

End: 876806

Strand: Direct

Name: dsbE [H]

Synonym: VS_0856

Alternate gene names: 218708856

Gene position: 876255-876806 (Clockwise)

Preceding gene: 218708855

Following gene: 218708857

Centisome position: 26.56

GC content: 45.29

Gene sequence:

>552_bases
ATGAACAAGAAGATTTTATTCATTCCATTGATTGCGTTCATGGTTCTAGCTGGAATCTTTGCGACTCAATTGATGCGTAA
CCAGTCGGGTGATGACCCGACTAAACTTGAATCGGTATTGATTGGTAAGCCAGTACCTGAGTTCGGTTTAGAAGACTTAG
AGCAACCGGGTAAGTTCCATGATCAAGCTATCTTTAAAGGTGAGCCACTGCTTCTAAATGTGTGGGCGACTTGGTGTCCT
ACTTGTTATGCAGAGCACTCTTACTTGAATAAGTTAGCGGGTCAAGGCGTTAAGATTATTGGCCTTAACTACAAAGATGA
TCGCAATAAAGCGGTAGGTTGGTTAAAAGAGCTGGGCAATCCATACTTGATCAGCCTGTTCGATGGTAACGGCATGCTAG
GTCTTGACCTTGGTGTGTATGGCGCTCCAGAGACTTTCCTCATTGATGCTAACGGCGTAGTTCGTTATCGCCATGTTGGT
GACGTGAACCCAACTAACTGGGCATCGACGCTTGAGCCGATGTACCAAGAGTTGTTGGAGGAAGCGAAATGA

Upstream 100 bases:

>100_bases
TGATTATGTCGATTGGTGGTGTTATTGCTATCAGTGACCGTCGTTACCGCTTCCGTAAGCCAACGAAAAAGTCTACTAAA
GAGCAGGAGGCTTAATTCGA

Downstream 100 bases:

>100_bases
TTAAGAAGACACTGATTGCTCTATTCGCTACATTTGCTATTTCGGCGACTGTTTCTGCTGCGCCTATCGAATTTCATGAA
TTTGATACCGTTGATCAAGA

Product: cytochrome c biogenesisprotein CcmG

Products: NA

Alternate protein names: Cytochrome c biogenesis protein CcmG [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNKKILFIPLIAFMVLAGIFATQLMRNQSGDDPTKLESVLIGKPVPEFGLEDLEQPGKFHDQAIFKGEPLLLNVWATWCP
TCYAEHSYLNKLAGQGVKIIGLNYKDDRNKAVGWLKELGNPYLISLFDGNGMLGLDLGVYGAPETFLIDANGVVRYRHVG
DVNPTNWASTLEPMYQELLEEAK

Sequences:

>Translated_183_residues
MNKKILFIPLIAFMVLAGIFATQLMRNQSGDDPTKLESVLIGKPVPEFGLEDLEQPGKFHDQAIFKGEPLLLNVWATWCP
TCYAEHSYLNKLAGQGVKIIGLNYKDDRNKAVGWLKELGNPYLISLFDGNGMLGLDLGVYGAPETFLIDANGVVRYRHVG
DVNPTNWASTLEPMYQELLEEAK
>Mature_183_residues
MNKKILFIPLIAFMVLAGIFATQLMRNQSGDDPTKLESVLIGKPVPEFGLEDLEQPGKFHDQAIFKGEPLLLNVWATWCP
TCYAEHSYLNKLAGQGVKIIGLNYKDDRNKAVGWLKELGNPYLISLFDGNGMLGLDLGVYGAPETFLIDANGVVRYRHVG
DVNPTNWASTLEPMYQELLEEAK

Specific function: Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=183, Percent_Identity=62.2950819672131, Blast_Score=259, Evalue=7e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004799
- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 20386; Mature: 20386

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKILFIPLIAFMVLAGIFATQLMRNQSGDDPTKLESVLIGKPVPEFGLEDLEQPGKFH
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHH
DQAIFKGEPLLLNVWATWCPTCYAEHSYLNKLAGQGVKIIGLNYKDDRNKAVGWLKELGN
CCCEECCCCEEEEEHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCC
PYLISLFDGNGMLGLDLGVYGAPETFLIDANGVVRYRHVGDVNPTNWASTLEPMYQELLE
CEEEEEECCCCEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
EAK
HCC
>Mature Secondary Structure
MNKKILFIPLIAFMVLAGIFATQLMRNQSGDDPTKLESVLIGKPVPEFGLEDLEQPGKFH
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHH
DQAIFKGEPLLLNVWATWCPTCYAEHSYLNKLAGQGVKIIGLNYKDDRNKAVGWLKELGN
CCCEECCCCEEEEEHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCC
PYLISLFDGNGMLGLDLGVYGAPETFLIDANGVVRYRHVGDVNPTNWASTLEPMYQELLE
CEEEEEECCCCEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
EAK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]