Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708848

Identifier: 218708848

GI number: 218708848

Start: 870589

End: 871101

Strand: Direct

Name: 218708848

Synonym: VS_0848

Alternate gene names: NA

Gene position: 870589-871101 (Clockwise)

Preceding gene: 218708847

Following gene: 218708849

Centisome position: 26.39

GC content: 43.08

Gene sequence:

>513_bases
ATGTTTGAAGCGCTTCCTTTAAACCCTATTGCTCTGATAGTCGGAGTTGGGGTTTTTACGTTATTCATCGTGATTTTGAT
TAGCAAAGTAAAAAGTGCAATTCAAAAGCAGATCGATACGTCACGCCTGCAAGTTCGTAACTTGGACAAAGAGCTTCAAA
AATCGAGTAAGCAATTACTTGAAGTTCGCTCTGTTGTGGTTGGCCTTGGTCAGAAAGTGACGGAACAGCAAGATCTGATA
AAACACTTGAATGAACGTATTGTTGAGTTGGAACATGCGGACACCGATGGGCGTTTGTATACACGTGCAACTAAAATGGT
TCAGCTTGGTGCTGGGATAAACGAACTGATCGAAGAGTGTGAATTACCTAAGGCAGAAGCTGAGCTGATGATGTCTCTGC
AGAATAAGCTCGCAGGTAAGGAAAAAATCCCTTCGTTAAGAAGTAACCCTTCATCGTATGATGAACAACCTGCATCCTCT
CGTGATCGTAGAGACCCGACTCGACGTCGTTAA

Upstream 100 bases:

>100_bases
TCATCCAAGGTGTTAGTAACCGTGATGGCAAGCTTCTTATCTTAGTCGATCTGAACAAGCTGTTAAGTGAAGACGAATGG
GATGAGATGGCTCACCTGTA

Downstream 100 bases:

>100_bases
ATTTAGCGCTTACTGCGTAATGAGCAATTGATGTTCATCACGTACACCTCTTAAAAGAAGCTTCGGCTTCTTTTTTTGTG
CCTGTTATACCTATATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLLEVRSVVVGLGQKVTEQQDLI
KHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEECELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASS
RDRRDPTRRR

Sequences:

>Translated_170_residues
MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLLEVRSVVVGLGQKVTEQQDLI
KHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEECELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASS
RDRRDPTRRR
>Mature_170_residues
MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLLEVRSVVVGLGQKVTEQQDLI
KHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEECELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASS
RDRRDPTRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19160; Mature: 19160

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVRSVVVGLGQKVTEQQDLIKHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEEC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
ELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASSRDRRDPTRRR
CCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFEALPLNPIALIVGVGVFTLFIVILISKVKSAIQKQIDTSRLQVRNLDKELQKSSKQLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVRSVVVGLGQKVTEQQDLIKHLNERIVELEHADTDGRLYTRATKMVQLGAGINELIEEC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
ELPKAEAELMMSLQNKLAGKEKIPSLRSNPSSYDEQPASSRDRRDPTRRR
CCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA