| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is cheY [H]
Identifier: 218708841
GI number: 218708841
Start: 863508
End: 863876
Strand: Direct
Name: cheY [H]
Synonym: VS_0841
Alternate gene names: 218708841
Gene position: 863508-863876 (Clockwise)
Preceding gene: 218708840
Following gene: 218708842
Centisome position: 26.17
GC content: 43.09
Gene sequence:
>369_bases ATGAAAATTCTCATTGTTGATGATTTTTCAACGATGCGCCGAATTGTTAAAAACCTACTTCGTGATTTAGGTTTCAACAA CACTCAAGAAGCAGACGATGGCTTGACCGCGTTACCTATGCTGAAAAAAGGCGAATTTGATTTCGTGGTAACTGACTGGA ACATGCCGGGTATGCAAGGTATTGATCTTCTAAAACACGTCCGTGCAGACGCTGAACTTAAGCACCTTCCAGTGCTTATG ATCACAGCAGAAGCTAAGCGTGAGCAGATCATCGAAGCAGCGCAAGCGGGTGTTAATGGTTACATTGTGAAGCCGTTCAC TGCCGCAACTCTAAAAGAGAAACTCGACAAGATTTTTGAGCGTTTATAA
Upstream 100 bases:
>100_bases AAGCCAATCTATGCAGCGTTTACGCACTAAGTTAAGTGCTTGGACACAGAACGACTAACAACACTGATTTTATTCAGTGG AGGCTAATTTGAACAAAAAC
Downstream 100 bases:
>100_bases GCACTCATAATAACCTGTTTCAGGCGCTTCATAGAGAGACATTAACTTTTTTGTTTCCCGTTTACCTCTAAAGCTGAAGC GTCACAAACTATGCGGAGTA
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGEFDFVVTDWNMPGMQGIDLLKHVRADAELKHLPVLM ITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFERL
Sequences:
>Translated_122_residues MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGEFDFVVTDWNMPGMQGIDLLKHVRADAELKHLPVLM ITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFERL >Mature_122_residues MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGEFDFVVTDWNMPGMQGIDLLKHVRADAELKHLPVLM ITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFERL
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY is likely to be involved in changing the direction of flagellar rotation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=66.3934426229508, Blast_Score=179, Evalue=5e-47, Organism=Escherichia coli, GI1786599, Length=121, Percent_Identity=30.5785123966942, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI145693157, Length=122, Percent_Identity=35.2459016393443, Blast_Score=70, Evalue=4e-14, Organism=Escherichia coli, GI1788550, Length=105, Percent_Identity=38.0952380952381, Blast_Score=66, Evalue=8e-13, Organism=Escherichia coli, GI1790437, Length=115, Percent_Identity=35.6521739130435, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1788713, Length=120, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1788521, Length=104, Percent_Identity=32.6923076923077, Blast_Score=59, Evalue=6e-11, Organism=Escherichia coli, GI1786784, Length=121, Percent_Identity=28.9256198347107, Blast_Score=59, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13799; Mature: 13799
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGEFDFVVTDWNMPGMQG CEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCHH IDLLKHVRADAELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE HHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH RL CC >Mature Secondary Structure MKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGEFDFVVTDWNMPGMQG CEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCHH IDLLKHVRADAELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE HHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH RL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1560774; 10984043; 7860605 [H]