| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is cheZ [H]
Identifier: 218708842
GI number: 218708842
Start: 864115
End: 864726
Strand: Direct
Name: cheZ [H]
Synonym: VS_0842
Alternate gene names: 218708842
Gene position: 864115-864726 (Clockwise)
Preceding gene: 218708841
Following gene: 218708843
Centisome position: 26.19
GC content: 42.97
Gene sequence:
>612_bases ATGCTTCAAGAAATAGGCAGTCTGACTCGTGACCTCCATGATTCTTTGACACAATTCAACTTTGACGAGCGTATTAACGT TATCGCAAATGATGAAATCCCTGACGCCAGGGATCGCCTTCAATATGTCATTGATAAAACGGAAGTTGCGGCGAACAAAA CGATGGACGCTGTCGATCGCTGTATGCCAATTGCAACTAATTTACACGAGTGTTTACTTCAAGTAAGGCCTCAATGGAAT GAACTGATGCATGGCCGCATTGAGCTAGTAACATTCAAAGCTTTATGCCACCGCATTGATGGATTACTTGTCCAAGTAGA AGGTGATAGTACTGAACTACGTGGACAACTGACTGAAATCTTGATGGCTCAGGATTTCCAAGATTTAACTGGGCAGATTA TTAGCAAAGTTATTACCTTGGTGAATGAGGTTGAAGGACGTCTGGTAGAGATTCTCACCGTATTCGGTGCGAATCAAATA GAACCAACACCAGAGACAGATAAGAAGTCATCTATTGCTCCAGAGGGTCCGATCATGAACCCAGAAGCTCGTGAGGATGC TGTTGCATCTCAAGATGAAGTCGACGATTTGTTATCCAGTCTTGGATTTTAA
Upstream 100 bases:
>100_bases AAATTAGTAGAGCTGCTTGCTTGAAAACGACGAGCAGCAAGGTGCTGATTCTCTTGTTAGAAGCATTTATGAAGATAATT TTAATCTTCAAGATAACCCA
Downstream 100 bases:
>100_bases AGGTAACGTATGAGCTACGATTTAGACGAAGATATTCTTCAGGACTTTTTAGTCGAAGCAGGAGAGATCCTCGAACTTCT ATCAGAACAACTGGTAGAGC
Product: Chemotaxis protein CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLQEIGSLTRDLHDSLTQFNFDERINVIANDEIPDARDRLQYVIDKTEVAANKTMDAVDRCMPIATNLHECLLQVRPQWN ELMHGRIELVTFKALCHRIDGLLVQVEGDSTELRGQLTEILMAQDFQDLTGQIISKVITLVNEVEGRLVEILTVFGANQI EPTPETDKKSSIAPEGPIMNPEAREDAVASQDEVDDLLSSLGF
Sequences:
>Translated_203_residues MLQEIGSLTRDLHDSLTQFNFDERINVIANDEIPDARDRLQYVIDKTEVAANKTMDAVDRCMPIATNLHECLLQVRPQWN ELMHGRIELVTFKALCHRIDGLLVQVEGDSTELRGQLTEILMAQDFQDLTGQIISKVITLVNEVEGRLVEILTVFGANQI EPTPETDKKSSIAPEGPIMNPEAREDAVASQDEVDDLLSSLGF >Mature_203_residues MLQEIGSLTRDLHDSLTQFNFDERINVIANDEIPDARDRLQYVIDKTEVAANKTMDAVDRCMPIATNLHECLLQVRPQWN ELMHGRIELVTFKALCHRIDGLLVQVEGDSTELRGQLTEILMAQDFQDLTGQIISKVITLVNEVEGRLVEILTVFGANQI EPTPETDKKSSIAPEGPIMNPEAREDAVASQDEVDDLLSSLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=206, Percent_Identity=34.9514563106796, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 22742; Mature: 22742
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQEIGSLTRDLHDSLTQFNFDERINVIANDEIPDARDRLQYVIDKTEVAANKTMDAVDR CHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CMPIATNLHECLLQVRPQWNELMHGRIELVTFKALCHRIDGLLVQVEGDSTELRGQLTEI HHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH LMAQDFQDLTGQIISKVITLVNEVEGRLVEILTVFGANQIEPTPETDKKSSIAPEGPIMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PEAREDAVASQDEVDDLLSSLGF CCHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MLQEIGSLTRDLHDSLTQFNFDERINVIANDEIPDARDRLQYVIDKTEVAANKTMDAVDR CHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CMPIATNLHECLLQVRPQWNELMHGRIELVTFKALCHRIDGLLVQVEGDSTELRGQLTEI HHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH LMAQDFQDLTGQIISKVITLVNEVEGRLVEILTVFGANQIEPTPETDKKSSIAPEGPIMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PEAREDAVASQDEVDDLLSSLGF CCHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7860605; 10052136; 10984043 [H]