| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ylxH [H]
Identifier: 218708839
GI number: 218708839
Start: 861851
End: 862738
Strand: Direct
Name: ylxH [H]
Synonym: VS_0839
Alternate gene names: 218708839
Gene position: 861851-862738 (Clockwise)
Preceding gene: 218708838
Following gene: 218708840
Centisome position: 26.12
GC content: 45.27
Gene sequence:
>888_bases ATGAATGAGAATATGATACACGATCAAGCTAGCGGCCTCCGTCGCTTAACCCAGCCTTCACTCACAAAAGTTATCGCTGT AACGGGTGGCAAGGGAGGCGTAGGTAAATCGAATGTAACGTTAGGTATGGCTATTTGTATGGCTCGCCAAGGCAAGAAAG TCATGGTACTGGATGCCGATTTAGGATTAGCTAACGTAGACATCATGCTCGGCATTCGTTCTAAACGAAATCTTGGGCAT GTGTTGGCTGGCGAGTGTGAACTTAAGGATGCGATTGTCGAAGGGCCGCACGGAATTAAAATTATTCCAGCGACATCAGG CACACAAAGCATGACTGAACTTTCACACGCTCAACACGCTGGATTGATTCGTGCTTTTGGTTCGCTTGAAGACGAGATGG ATATCTTATTGGTTGATACCGCAGCGGGTATATCCGATATGGTCATCAGCTTCTCAAGAGCTGCGCAGGACGTGGTTGTG GTGGTTTGTGATGAACCAACGTCGATTACTGATGCATATGCATTGATTAAGCTGTTGAGTCGAGAGCACCAAGTACAGCG ATTCAAAATTGTTGCAAATATGGTCAGAAGCTATCGCGAAGGCCGAGAATTATTTGCAAAGTTGACTTTGGTCACAGAGC GCTTCTTGAATGTGAGCCTCGAACTCGTAGCATGTATTCCTTTAGATGATAAAGTACGTCAATCAGTTAAGAGACAGAAA ATCGTAGTCGATGCGTTTCCTCGCTCTCCAGCTGCATTGGCAATCAGCTCTTTGGCTAATAAGGCATTGACCTGGCCAAT ACCAAAAACACCAAGCGGACACTTGGAGTTTTTTGTTGAAAGGCTGCTGAACCGTACTGAATTTATAGAGGAACCATTTG GTGAATAA
Upstream 100 bases:
>100_bases TACATGATTGCTAAGGCCAATGAGTTATTAGAAAAATCGACAGAGAATGAACCTCATTACTGGAATAGCGATTCTGAAGG GCTCTAGGCGGCGGATAAAT
Downstream 100 bases:
>100_bases AGCGCTTACTTACGATCAACATGCTAATCACAATAGCCAGCAGGCTTTTTTTGAGAAGTACTCTGTGTTGGTTAAGCGTA TCGCTCATCATTTGTTGGGG
Product: flagellar biosynthesis protein FlhG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNENMIHDQASGLRRLTQPSLTKVIAVTGGKGGVGKSNVTLGMAICMARQGKKVMVLDADLGLANVDIMLGIRSKRNLGH VLAGECELKDAIVEGPHGIKIIPATSGTQSMTELSHAQHAGLIRAFGSLEDEMDILLVDTAAGISDMVISFSRAAQDVVV VVCDEPTSITDAYALIKLLSREHQVQRFKIVANMVRSYREGRELFAKLTLVTERFLNVSLELVACIPLDDKVRQSVKRQK IVVDAFPRSPAALAISSLANKALTWPIPKTPSGHLEFFVERLLNRTEFIEEPFGE
Sequences:
>Translated_295_residues MNENMIHDQASGLRRLTQPSLTKVIAVTGGKGGVGKSNVTLGMAICMARQGKKVMVLDADLGLANVDIMLGIRSKRNLGH VLAGECELKDAIVEGPHGIKIIPATSGTQSMTELSHAQHAGLIRAFGSLEDEMDILLVDTAAGISDMVISFSRAAQDVVV VVCDEPTSITDAYALIKLLSREHQVQRFKIVANMVRSYREGRELFAKLTLVTERFLNVSLELVACIPLDDKVRQSVKRQK IVVDAFPRSPAALAISSLANKALTWPIPKTPSGHLEFFVERLLNRTEFIEEPFGE >Mature_295_residues MNENMIHDQASGLRRLTQPSLTKVIAVTGGKGGVGKSNVTLGMAICMARQGKKVMVLDADLGLANVDIMLGIRSKRNLGH VLAGECELKDAIVEGPHGIKIIPATSGTQSMTELSHAQHAGLIRAFGSLEDEMDILLVDTAAGISDMVISFSRAAQDVVV VVCDEPTSITDAYALIKLLSREHQVQRFKIVANMVRSYREGRELFAKLTLVTERFLNVSLELVACIPLDDKVRQSVKRQK IVVDAFPRSPAALAISSLANKALTWPIPKTPSGHLEFFVERLLNRTEFIEEPFGE
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=233, Percent_Identity=24.8927038626609, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 32155; Mature: 32155
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENMIHDQASGLRRLTQPSLTKVIAVTGGKGGVGKSNVTLGMAICMARQGKKVMVLDAD CCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC LGLANVDIMLGIRSKRNLGHVLAGECELKDAIVEGPHGIKIIPATSGTQSMTELSHAQHA CCEEEEEEEEEECCCCCCCCEEECCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH GLIRAFGSLEDEMDILLVDTAAGISDMVISFSRAAQDVVVVVCDEPTSITDAYALIKLLS HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH REHQVQRFKIVANMVRSYREGRELFAKLTLVTERFLNVSLELVACIPLDDKVRQSVKRQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHE IVVDAFPRSPAALAISSLANKALTWPIPKTPSGHLEFFVERLLNRTEFIEEPFGE EEEEECCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNENMIHDQASGLRRLTQPSLTKVIAVTGGKGGVGKSNVTLGMAICMARQGKKVMVLDAD CCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC LGLANVDIMLGIRSKRNLGHVLAGECELKDAIVEGPHGIKIIPATSGTQSMTELSHAQHA CCEEEEEEEEEECCCCCCCCEEECCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH GLIRAFGSLEDEMDILLVDTAAGISDMVISFSRAAQDVVVVVCDEPTSITDAYALIKLLS HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH REHQVQRFKIVANMVRSYREGRELFAKLTLVTERFLNVSLELVACIPLDDKVRQSVKRQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHE IVVDAFPRSPAALAISSLANKALTWPIPKTPSGHLEFFVERLLNRTEFIEEPFGE EEEEECCCCCHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]