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The map label for this gene is yajC [H]

Identifier: 218708622

GI number: 218708622

Start: 624667

End: 624996

Strand: Direct

Name: yajC [H]

Synonym: VS_0600

Alternate gene names: 218708622

Gene position: 624667-624996 (Clockwise)

Preceding gene: 218708621

Following gene: 218708623

Centisome position: 18.93

GC content: 45.45

Gene sequence:

>330_bases
ATGTTTATTTCTCAAGCTCACGCAGCAGCAGAAGGTGCACCAGCAGGCGGCGGTTTCGAAATGCTTATCATGCTAGGTAT
GTTCGCTGTGATCTTCTACTTCATGATCTACCGTCCACAAGCTAAGCGTGTTAAAGAGCACAAGAGCCTTATGTCTTCTA
TGGGCAAAGGCGATGAAGTTCTTACAAGCGGCGGCCTAATCGGCAAGATCACTAAGATTGCTGAAGACAGCGACTACGTT
GCTATCGAACTGAACGCAAACAACGAAGTCGTTATCAAGAAAGACTTCGTTACAGCAGTGCTACCAAAAGGTACTCTGAA
ATCACTATAA

Upstream 100 bases:

>100_bases
TTGCGAGCCCTATCTCTCTTCCGAGTGATGGGGCTTGAAAATAAAGGGATACGACCCAATTAGACAAACAATTACGAAAA
TATAATAGAGGATGTTTTAA

Downstream 100 bases:

>100_bases
ACAGCTAGAGGATCCTCGCTGTGCTAAACCGTTATCCGTTATGGAAGTATTTGATGGTGATGTTTGCCATCGCTATCGCT
GCGTTGTACGCACTTCCAAA

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MFISQAHAAAEGAPAGGGFEMLIMLGMFAVIFYFMIYRPQAKRVKEHKSLMSSMGKGDEVLTSGGLIGKITKIAEDSDYV
AIELNANNEVVIKKDFVTAVLPKGTLKSL

Sequences:

>Translated_109_residues
MFISQAHAAAEGAPAGGGFEMLIMLGMFAVIFYFMIYRPQAKRVKEHKSLMSSMGKGDEVLTSGGLIGKITKIAEDSDYV
AIELNANNEVVIKKDFVTAVLPKGTLKSL
>Mature_109_residues
MFISQAHAAAEGAPAGGGFEMLIMLGMFAVIFYFMIYRPQAKRVKEHKSLMSSMGKGDEVLTSGGLIGKITKIAEDSDYV
AIELNANNEVVIKKDFVTAVLPKGTLKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=109, Percent_Identity=63.302752293578, Blast_Score=135, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11756; Mature: 11756

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISQAHAAAEGAPAGGGFEMLIMLGMFAVIFYFMIYRPQAKRVKEHKSLMSSMGKGDEV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCE
LTSGGLIGKITKIAEDSDYVAIELNANNEVVIKKDFVTAVLPKGTLKSL
EECCCCHHHHHHHCCCCCEEEEEECCCCEEEEEECHHHHHCCCCCCCCC
>Mature Secondary Structure
MFISQAHAAAEGAPAGGGFEMLIMLGMFAVIFYFMIYRPQAKRVKEHKSLMSSMGKGDEV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCE
LTSGGLIGKITKIAEDSDYVAIELNANNEVVIKKDFVTAVLPKGTLKSL
EECCCCHHHHHHHCCCCCEEEEEECCCCEEEEEECHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]