| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is pstC [H]
Identifier: 218708607
GI number: 218708607
Start: 607995
End: 610211
Strand: Direct
Name: pstC [H]
Synonym: VS_0585
Alternate gene names: 218708607
Gene position: 607995-610211 (Clockwise)
Preceding gene: 218708604
Following gene: 218708608
Centisome position: 18.43
GC content: 45.2
Gene sequence:
>2217_bases ATGGCTTCAGCCCAATTTTCATTGAAAGAGCGCGACAAAAAAAGATGGTTGAAAGATCGTCTCGTCCGTTTTTCGGTGAC ATGTGGCGCGGTCAGTGTTCTAGCTGCTCTGGTGCTGATCTTTGTTTACTTGGCGATGGTCATTTTACCGGTATTTTCTG ATACTGGTTTAGATACTGACCAAGCCGTGAAGACCGTAGCCATAGAAAAGCCTATCGCCTTATCCGTGGATGAATACGGT CAGCATGCGTTTACTATCGAAAAATCCGGTTTGGTGCAATTTTGGGATTTAGAGTCTCAAAATACACATTCTTACTTTGA GCGTAATGTTTTAGCTAACCCCATCGCTTTTTCTCGAAATACCCCATCTGAAAACTGGTTTGCCTTTGCTGATAGCGCAA GCAACCTTACTTTTTTCTACCCTGAGTATAGTGCGCCTGTGCTGCAAAAGGGCAGTGAAGCCGAACCTAAAATTGAGCAA ATCGATCTCCCGGAACCGTTTTTAAATGATGAATCATCAAACGGAACAACAATCGAAAAATTTGCGTTCTCTAAGAATGG ACGTGGTATCACGGTTGCCGCTCAGCTAAGCGATCAACGAGTTTTGGTTAAGTGGTACCAGAGTGATCTTACTGGTCAGT ATGTTTTTCAGAAGAGTCAATGGCTGTCGGATAAGTTGGGTTTACAGCAACAGTTGTTAGTCACGCCTGATGGCCAAACT TTATATCTTCGAGCACAATCGGATTTAGTTGTATTGAAGTTATCCGATAGCGGCTTCAATGTTCGTGAAGTGATTGATCT TAGCTTAAATGATGCGAAGCACTCGGTGAAAAGTATCGATTTACTGTCTGGAGCTTATTCACTGTTGGTTACGCATGAGG ACGGACAGGTTTCTCAGTGGTTCGATGTACTCAAAGATGAAAAGCGTAGCCTGACCCATATTCGCGACTTCCAACTCGCC GAAGAGGTTCAGTTTATTCTGCCAGATACTTATAGAAAGGGTTTTTATAGTTTCTATCAGAATGGCACATTACAAAGCCA CTATACGACCAGTGAAAAGCTGTCGCTGTTTGAGCGCGCATTTGATAAGTCACCACAATTAGCGGCTATGTCTGCTAACG AACTGCATTTGGCGACGCTGATTGATGGCACCATCAGCGTGGCTAAAGTTGATAACGAATATCCGCAAATATCATTCTCA TCGCTTTGGCAAAAAGTCTGGTACGAAAGCTATCCTGAGCCACAATACGTTTGGCAATCAACGTCGGCGAACGATGACTT TGAAGAAAAATTCAGTTTAGTCCCTATCACATTCGGTACTATCAAAGCCGCTTTGTTTGCGATGATGTTTGCCGTGCCGG TTGCTGTGCTCGGAGCCATTTACACCGCATACTTCATGTCTCCACGAATGCGAAGAGTCGTGAAGCCGTCGATAGAACTG ATGGAAGCTCTTCCGACCGTTATCATCGGATTCTTGGCTGGGCTTTGGTTTGCTCCCATTGTTGAAACGCATTTAACGGC CGTCTTCTCGTTAATGGTGCTATTACCACTGAGCACGCTACTGACTGGGCTTGTTTGGTTCTGTTTGCCAAAAATGGTGA CGAGCCGTTTTACTAATGGTTGGCATGCTCTGATATTGATCCCGGTATTGGTGATTACTGTGATGGCAGTCTTTGCTGGT GAAAATGGTATGGAAGCCTTGTTGTTTGGTGGTGATATTCGTACCTTCTTGGCTAACTATGGCATCGACTTTGACCAACG GAATGCGCTGGTGGTTGGCTTCGCTATGGGCTTTGCTGTCATCCCAACAATTTTCACGATTGCAGAAGACGCTATTTTCT CTGTGCCAAAACATTTATCCGATGGCTCACTGGCGCTGGGCGCAACAGCGTGGCAGACCCTTATTTATGTGGTGTTATTG ACGGCTAGCCCAGGTATCTTTTCTGCAATCATGATGGGGCTAGGACGAGCGGTTGGCGAGACTATGATTGTCTTGATGGC GACAGGTAACACCCCTATTCTTGACTGGAATATTTTGGAAGGGATGAGGACATTATCGGCAACAATTGCTGTCGAGTTAC CAGAGTCCGAGGTGGGTGGTTCTCACTTCCGATTGTTGTTCTTAGCAGCACTCTTACTGTTTATTTTTACGTTCGCGGTG AACTCTGTCGCAGAGTGGGTTAGACAAAGACTGAGAGATAAATATCGTGCGCTGTAG
Upstream 100 bases:
>100_bases ACAAACTTGTTATTAGTTTCAGTTGTTTAACGTAACTTGTAATATAATTGTCATCTAACGTACATATTATGTCAGTAGCT AAAAAAAGGTAGATAAACAG
Downstream 100 bases:
>100_bases TTTTAAAACTCTACCTCAATCTCTATCAATGGCTGTTCGCTGTTTGATTAGCGTATCTCACGAACTTGGCTCTTTCTTGG GTTCAGCACGTCAGAGCAAG
Product: ABC transporter transmembrane protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 738; Mature: 737
Protein sequence:
>738_residues MASAQFSLKERDKKRWLKDRLVRFSVTCGAVSVLAALVLIFVYLAMVILPVFSDTGLDTDQAVKTVAIEKPIALSVDEYG QHAFTIEKSGLVQFWDLESQNTHSYFERNVLANPIAFSRNTPSENWFAFADSASNLTFFYPEYSAPVLQKGSEAEPKIEQ IDLPEPFLNDESSNGTTIEKFAFSKNGRGITVAAQLSDQRVLVKWYQSDLTGQYVFQKSQWLSDKLGLQQQLLVTPDGQT LYLRAQSDLVVLKLSDSGFNVREVIDLSLNDAKHSVKSIDLLSGAYSLLVTHEDGQVSQWFDVLKDEKRSLTHIRDFQLA EEVQFILPDTYRKGFYSFYQNGTLQSHYTTSEKLSLFERAFDKSPQLAAMSANELHLATLIDGTISVAKVDNEYPQISFS SLWQKVWYESYPEPQYVWQSTSANDDFEEKFSLVPITFGTIKAALFAMMFAVPVAVLGAIYTAYFMSPRMRRVVKPSIEL MEALPTVIIGFLAGLWFAPIVETHLTAVFSLMVLLPLSTLLTGLVWFCLPKMVTSRFTNGWHALILIPVLVITVMAVFAG ENGMEALLFGGDIRTFLANYGIDFDQRNALVVGFAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLIYVVLL TASPGIFSAIMMGLGRAVGETMIVLMATGNTPILDWNILEGMRTLSATIAVELPESEVGGSHFRLLFLAALLLFIFTFAV NSVAEWVRQRLRDKYRAL
Sequences:
>Translated_738_residues MASAQFSLKERDKKRWLKDRLVRFSVTCGAVSVLAALVLIFVYLAMVILPVFSDTGLDTDQAVKTVAIEKPIALSVDEYG QHAFTIEKSGLVQFWDLESQNTHSYFERNVLANPIAFSRNTPSENWFAFADSASNLTFFYPEYSAPVLQKGSEAEPKIEQ IDLPEPFLNDESSNGTTIEKFAFSKNGRGITVAAQLSDQRVLVKWYQSDLTGQYVFQKSQWLSDKLGLQQQLLVTPDGQT LYLRAQSDLVVLKLSDSGFNVREVIDLSLNDAKHSVKSIDLLSGAYSLLVTHEDGQVSQWFDVLKDEKRSLTHIRDFQLA EEVQFILPDTYRKGFYSFYQNGTLQSHYTTSEKLSLFERAFDKSPQLAAMSANELHLATLIDGTISVAKVDNEYPQISFS SLWQKVWYESYPEPQYVWQSTSANDDFEEKFSLVPITFGTIKAALFAMMFAVPVAVLGAIYTAYFMSPRMRRVVKPSIEL MEALPTVIIGFLAGLWFAPIVETHLTAVFSLMVLLPLSTLLTGLVWFCLPKMVTSRFTNGWHALILIPVLVITVMAVFAG ENGMEALLFGGDIRTFLANYGIDFDQRNALVVGFAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLIYVVLL TASPGIFSAIMMGLGRAVGETMIVLMATGNTPILDWNILEGMRTLSATIAVELPESEVGGSHFRLLFLAALLLFIFTFAV NSVAEWVRQRLRDKYRAL >Mature_737_residues ASAQFSLKERDKKRWLKDRLVRFSVTCGAVSVLAALVLIFVYLAMVILPVFSDTGLDTDQAVKTVAIEKPIALSVDEYGQ HAFTIEKSGLVQFWDLESQNTHSYFERNVLANPIAFSRNTPSENWFAFADSASNLTFFYPEYSAPVLQKGSEAEPKIEQI DLPEPFLNDESSNGTTIEKFAFSKNGRGITVAAQLSDQRVLVKWYQSDLTGQYVFQKSQWLSDKLGLQQQLLVTPDGQTL YLRAQSDLVVLKLSDSGFNVREVIDLSLNDAKHSVKSIDLLSGAYSLLVTHEDGQVSQWFDVLKDEKRSLTHIRDFQLAE EVQFILPDTYRKGFYSFYQNGTLQSHYTTSEKLSLFERAFDKSPQLAAMSANELHLATLIDGTISVAKVDNEYPQISFSS LWQKVWYESYPEPQYVWQSTSANDDFEEKFSLVPITFGTIKAALFAMMFAVPVAVLGAIYTAYFMSPRMRRVVKPSIELM EALPTVIIGFLAGLWFAPIVETHLTAVFSLMVLLPLSTLLTGLVWFCLPKMVTSRFTNGWHALILIPVLVITVMAVFAGE NGMEALLFGGDIRTFLANYGIDFDQRNALVVGFAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLIYVVLLT ASPGIFSAIMMGLGRAVGETMIVLMATGNTPILDWNILEGMRTLSATIAVELPESEVGGSHFRLLFLAALLLFIFTFAVN SVAEWVRQRLRDKYRAL
Specific function: Part of a binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4590
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=362, Percent_Identity=24.585635359116, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 82338; Mature: 82207
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAQFSLKERDKKRWLKDRLVRFSVTCGAVSVLAALVLIFVYLAMVILPVFSDTGLDTD CCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QAVKTVAIEKPIALSVDEYGQHAFTIEKSGLVQFWDLESQNTHSYFERNVLANPIAFSRN HHHHHHEECCCCEECHHHCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCEECCC TPSENWFAFADSASNLTFFYPEYSAPVLQKGSEAEPKIEQIDLPEPFLNDESSNGTTIEK CCCCCCEEEECCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE FAFSKNGRGITVAAQLSDQRVLVKWYQSDLTGQYVFQKSQWLSDKLGLQQQLLVTPDGQT EEECCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCE LYLRAQSDLVVLKLSDSGFNVREVIDLSLNDAKHSVKSIDLLSGAYSLLVTHEDGQVSQW EEEEECCCEEEEEECCCCCCHHHHEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHH FDVLKDEKRSLTHIRDFQLAEEVQFILPDTYRKGFYSFYQNGTLQSHYTTSEKLSLFERA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH FDKSPQLAAMSANELHLATLIDGTISVAKVDNEYPQISFSSLWQKVWYESYPEPQYVWQS HCCCCCEEEECCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHEECC TSANDDFEEKFSLVPITFGTIKAALFAMMFAVPVAVLGAIYTAYFMSPRMRRVVKPSIEL CCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHH MEALPTVIIGFLAGLWFAPIVETHLTAVFSLMVLLPLSTLLTGLVWFCLPKMVTSRFTNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WHALILIPVLVITVMAVFAGENGMEALLFGGDIRTFLANYGIDFDQRNALVVGFAMGFAV HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEEHHHHHHH IPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLIYVVLLTASPGIFSAIMMGLGRAVGE HHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC TMIVLMATGNTPILDWNILEGMRTLSATIAVELPESEVGGSHFRLLFLAALLLFIFTFAV EEEEEEECCCCCEEEHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH NSVAEWVRQRLRDKYRAL HHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASAQFSLKERDKKRWLKDRLVRFSVTCGAVSVLAALVLIFVYLAMVILPVFSDTGLDTD CCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QAVKTVAIEKPIALSVDEYGQHAFTIEKSGLVQFWDLESQNTHSYFERNVLANPIAFSRN HHHHHHEECCCCEECHHHCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCEECCC TPSENWFAFADSASNLTFFYPEYSAPVLQKGSEAEPKIEQIDLPEPFLNDESSNGTTIEK CCCCCCEEEECCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE FAFSKNGRGITVAAQLSDQRVLVKWYQSDLTGQYVFQKSQWLSDKLGLQQQLLVTPDGQT EEECCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCE LYLRAQSDLVVLKLSDSGFNVREVIDLSLNDAKHSVKSIDLLSGAYSLLVTHEDGQVSQW EEEEECCCEEEEEECCCCCCHHHHEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHH FDVLKDEKRSLTHIRDFQLAEEVQFILPDTYRKGFYSFYQNGTLQSHYTTSEKLSLFERA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH FDKSPQLAAMSANELHLATLIDGTISVAKVDNEYPQISFSSLWQKVWYESYPEPQYVWQS HCCCCCEEEECCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHEECC TSANDDFEEKFSLVPITFGTIKAALFAMMFAVPVAVLGAIYTAYFMSPRMRRVVKPSIEL CCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHH MEALPTVIIGFLAGLWFAPIVETHLTAVFSLMVLLPLSTLLTGLVWFCLPKMVTSRFTNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WHALILIPVLVITVMAVFAGENGMEALLFGGDIRTFLANYGIDFDQRNALVVGFAMGFAV HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEEHHHHHHH IPTIFTIAEDAIFSVPKHLSDGSLALGATAWQTLIYVVLLTASPGIFSAIMMGLGRAVGE HHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC TMIVLMATGNTPILDWNILEGMRTLSATIAVELPESEVGGSHFRLLFLAALLLFIFTFAV EEEEEEECCCCCEEEHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH NSVAEWVRQRLRDKYRAL HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]