| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yqgH [H]
Identifier: 218708608
GI number: 218708608
Start: 610322
End: 612031
Strand: Direct
Name: yqgH [H]
Synonym: VS_0586
Alternate gene names: 218708608
Gene position: 610322-612031 (Clockwise)
Preceding gene: 218708607
Following gene: 218708609
Centisome position: 18.5
GC content: 44.56
Gene sequence:
>1710_bases ATGAATAAACTGAAGTCATTATTGTCTTGGATTAAATCAGGCTCTCCGTGGATCTGGCTTACGGGCGGGGCGGTGAGCAT CAGTATGCTTTCGGTTCTTGGCCTAATGCTGTTGATTGGCTGGAAGGGCTTGACTTATTTTTGGCCTGCTCCTTTGTACC AATGGCAAGTGGATTCTAAAGGTGCATCGTTAGTTGTCGGCCTCGACGAAACGGTAGTAAAGCAAGATGTATTGATTGGC CAGTTATATGAACGAAAATACATCCCGATAGAGCAAGTCCCACAAGTACACGACCTCTTGTCGACTCAAAACCTGTCGAC TGGGCTAATTCAGCGCTTAAGTATCAAAGTTGCCAACAGGGAGATTTATCCAGCGGACTTTGTTTCCATTTTGGATGTGA ACTTACGTGAACCAACCACCCCACCTGACTGGGCTGTGATTGAGCGAAGTCGAGGTGGTTATTTCTTTGGTAAACCAGTG GGTTTTATAACCGCTTCTGGCACCTTTGATTCGAACATAGACCAAAAGCTCGAGCAAGGCTTGGCGTTCGCTGATACGTT ACGTAAAGAAACGTCGCGTGTAGTGAACCAAGAAATCCGCAATATCAGCTGGCAATTGGAAAATTTGCGCTTAGAAAAAC GTAAGCTTGAACTCAATGAGTCAGTGAGCGATGAATACCTTAAAACCTATACTCAAACTAAACTGGAATTAAATCGCCAG TTGGCTGAAGCCGAAGTAAAGCTTGAGCATCTTAGAACACAGCTCAATGTCGAAAGCTTGTTGGTAGAAGATATGACAGG AGAGCAGGTTGAAATTTCGCTCAGTCATATTTTGGATTATTGGTACCCGAATAATATGTCTTATCTTGAAAAGGTTGGAC ATTGGGGAAAACAAGTTTGGAAGTTCTTGTCGGAGAACCCACGAGACTCAAACTCTGAAGGTGGTGTGTTTCCTGCGATT TTTGGCACGGTACTGTTGGTTATTCTTATGTCGATTGTAGTGATGCCTCTTGGTGTGGTTGCTGCGATATATCTTCATGA ATATGCAAAAAACAACGCATTAACACGTTTGATTCGTATTGCCGTAATTAACTTAGCGGGTGTACCGTCGATTGTGTATG GTGTATTCGGCTTAGGATTCTTTGTGTATACCATAGGTGGCTCAATCGATTCTTTGTTTTACGCAGAACGATTACCCGCT CCGACATTTGGTACGCCGGGCCTATTATGGTCCGCATTGACCTTAGCGGTATTAACATTACCCGTTGTTATTGTAACAAC GGAAGAGGGCTTAACGCGCATCCCTAGCTCCGTGAGGCACGGTTCATTAGCGCTTGGTGCTACTCAATTCGAGACGCTTT GGCGCATTGTTTTACCGATGGCAAGCCCTGCGATTATCACCGGTTTGATTTTGGCAATCGCGAGAGCTGCGGGGGAGGTT GCCCCATTAATGCTGGTGGGTGTGGTGAAACTCGCATCAAGCTTGCCTGTGGATGGTCAGTTCCCATACCTGCATTTAGA CAGAAAGTTCATGCATTTAGGTTTTCATATCTATGATGTTGGGTTTCAAACCTCTAATATCGAAGCGGCACGCCCTTTAG TGTATGCGACTTCATTTTTATTGGTTACGGTTATCGTTGGACTGAATTTAACGGCCATCAATATCCGTAATAACTTGCGT GAAAAATACCGAACCTTAGGACAAGATTAG
Upstream 100 bases:
>100_bases CTACCTCAATCTCTATCAATGGCTGTTCGCTGTTTGATTAGCGTATCTCACGAACTTGGCTCTTTCTTGGGTTCAGCACG TCAGAGCAAGGTCGTTCATG
Downstream 100 bases:
>100_bases ATGTTCTCGATTAATGAAACCTTGGGTTACCAAGCACCACTTGATGTTCACAACTTGAAGGATGAGCAAATTGCTATCTC GATTGAAGGGCTGAATCTTT
Product: ABC transporter transmembrane protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MNKLKSLLSWIKSGSPWIWLTGGAVSISMLSVLGLMLLIGWKGLTYFWPAPLYQWQVDSKGASLVVGLDETVVKQDVLIG QLYERKYIPIEQVPQVHDLLSTQNLSTGLIQRLSIKVANREIYPADFVSILDVNLREPTTPPDWAVIERSRGGYFFGKPV GFITASGTFDSNIDQKLEQGLAFADTLRKETSRVVNQEIRNISWQLENLRLEKRKLELNESVSDEYLKTYTQTKLELNRQ LAEAEVKLEHLRTQLNVESLLVEDMTGEQVEISLSHILDYWYPNNMSYLEKVGHWGKQVWKFLSENPRDSNSEGGVFPAI FGTVLLVILMSIVVMPLGVVAAIYLHEYAKNNALTRLIRIAVINLAGVPSIVYGVFGLGFFVYTIGGSIDSLFYAERLPA PTFGTPGLLWSALTLAVLTLPVVIVTTEEGLTRIPSSVRHGSLALGATQFETLWRIVLPMASPAIITGLILAIARAAGEV APLMLVGVVKLASSLPVDGQFPYLHLDRKFMHLGFHIYDVGFQTSNIEAARPLVYATSFLLVTVIVGLNLTAINIRNNLR EKYRTLGQD
Sequences:
>Translated_569_residues MNKLKSLLSWIKSGSPWIWLTGGAVSISMLSVLGLMLLIGWKGLTYFWPAPLYQWQVDSKGASLVVGLDETVVKQDVLIG QLYERKYIPIEQVPQVHDLLSTQNLSTGLIQRLSIKVANREIYPADFVSILDVNLREPTTPPDWAVIERSRGGYFFGKPV GFITASGTFDSNIDQKLEQGLAFADTLRKETSRVVNQEIRNISWQLENLRLEKRKLELNESVSDEYLKTYTQTKLELNRQ LAEAEVKLEHLRTQLNVESLLVEDMTGEQVEISLSHILDYWYPNNMSYLEKVGHWGKQVWKFLSENPRDSNSEGGVFPAI FGTVLLVILMSIVVMPLGVVAAIYLHEYAKNNALTRLIRIAVINLAGVPSIVYGVFGLGFFVYTIGGSIDSLFYAERLPA PTFGTPGLLWSALTLAVLTLPVVIVTTEEGLTRIPSSVRHGSLALGATQFETLWRIVLPMASPAIITGLILAIARAAGEV APLMLVGVVKLASSLPVDGQFPYLHLDRKFMHLGFHIYDVGFQTSNIEAARPLVYATSFLLVTVIVGLNLTAINIRNNLR EKYRTLGQD >Mature_569_residues MNKLKSLLSWIKSGSPWIWLTGGAVSISMLSVLGLMLLIGWKGLTYFWPAPLYQWQVDSKGASLVVGLDETVVKQDVLIG QLYERKYIPIEQVPQVHDLLSTQNLSTGLIQRLSIKVANREIYPADFVSILDVNLREPTTPPDWAVIERSRGGYFFGKPV GFITASGTFDSNIDQKLEQGLAFADTLRKETSRVVNQEIRNISWQLENLRLEKRKLELNESVSDEYLKTYTQTKLELNRQ LAEAEVKLEHLRTQLNVESLLVEDMTGEQVEISLSHILDYWYPNNMSYLEKVGHWGKQVWKFLSENPRDSNSEGGVFPAI FGTVLLVILMSIVVMPLGVVAAIYLHEYAKNNALTRLIRIAVINLAGVPSIVYGVFGLGFFVYTIGGSIDSLFYAERLPA PTFGTPGLLWSALTLAVLTLPVVIVTTEEGLTRIPSSVRHGSLALGATQFETLWRIVLPMASPAIITGLILAIARAAGEV APLMLVGVVKLASSLPVDGQFPYLHLDRKFMHLGFHIYDVGFQTSNIEAARPLVYATSFLLVTVIVGLNLTAINIRNNLR EKYRTLGQD
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=251, Percent_Identity=30.6772908366534, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1790164, Length=174, Percent_Identity=29.8850574712644, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 63360; Mature: 63360
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLKSLLSWIKSGSPWIWLTGGAVSISMLSVLGLMLLIGWKGLTYFWPAPLYQWQVDSK CCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCC GASLVVGLDETVVKQDVLIGQLYERKYIPIEQVPQVHDLLSTQNLSTGLIQRLSIKVANR CCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHEEECC EIYPADFVSILDVNLREPTTPPDWAVIERSRGGYFFGKPVGFITASGTFDSNIDQKLEQG CCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEECCCCEEEEECCCCCCCHHHHHHCC LAFADTLRKETSRVVNQEIRNISWQLENLRLEKRKLELNESVSDEYLKTYTQTKLELNRQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LAEAEVKLEHLRTQLNVESLLVEDMTGEQVEISLSHILDYWYPNNMSYLEKVGHWGKQVW HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHH KFLSENPRDSNSEGGVFPAIFGTVLLVILMSIVVMPLGVVAAIYLHEYAKNNALTRLIRI HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVINLAGVPSIVYGVFGLGFFVYTIGGSIDSLFYAERLPAPTFGTPGLLWSALTLAVLTL HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH PVVIVTTEEGLTRIPSSVRHGSLALGATQFETLWRIVLPMASPAIITGLILAIARAAGEV CEEEEECCCHHHHCCHHHCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHH APLMLVGVVKLASSLPVDGQFPYLHLDRKFMHLGFHIYDVGFQTSNIEAARPLVYATSFL HHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHH LVTVIVGLNLTAINIRNNLREKYRTLGQD HHHHHHHCCCEEEHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKLKSLLSWIKSGSPWIWLTGGAVSISMLSVLGLMLLIGWKGLTYFWPAPLYQWQVDSK CCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCC GASLVVGLDETVVKQDVLIGQLYERKYIPIEQVPQVHDLLSTQNLSTGLIQRLSIKVANR CCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHEEECC EIYPADFVSILDVNLREPTTPPDWAVIERSRGGYFFGKPVGFITASGTFDSNIDQKLEQG CCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEECCCCEEEEECCCCCCCHHHHHHCC LAFADTLRKETSRVVNQEIRNISWQLENLRLEKRKLELNESVSDEYLKTYTQTKLELNRQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LAEAEVKLEHLRTQLNVESLLVEDMTGEQVEISLSHILDYWYPNNMSYLEKVGHWGKQVW HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHH KFLSENPRDSNSEGGVFPAIFGTVLLVILMSIVVMPLGVVAAIYLHEYAKNNALTRLIRI HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVINLAGVPSIVYGVFGLGFFVYTIGGSIDSLFYAERLPAPTFGTPGLLWSALTLAVLTL HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH PVVIVTTEEGLTRIPSSVRHGSLALGATQFETLWRIVLPMASPAIITGLILAIARAAGEV CEEEEECCCHHHHCCHHHCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHH APLMLVGVVKLASSLPVDGQFPYLHLDRKFMHLGFHIYDVGFQTSNIEAARPLVYATSFL HHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHH LVTVIVGLNLTAINIRNNLREKYRTLGQD HHHHHHHCCCEEEHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]