Click here to switch to the map view.

The map label for this gene is pstS [H]

Identifier: 218708604

GI number: 218708604

Start: 603140

End: 604117

Strand: Direct

Name: pstS [H]

Synonym: VS_0581

Alternate gene names: 218708604

Gene position: 603140-604117 (Clockwise)

Preceding gene: 218708603

Following gene: 218708607

Centisome position: 18.28

GC content: 47.55

Gene sequence:

>978_bases
ATGAGTTCTTTAATACGCCGGATGCGTTTCCCCATCAGTTCATTATTAGCATTAGCTTTGGTTACCCCTGTTCATGCCGA
GCAAAGTGTCGATTCTCTTCCTGATTATTCTAAGGTTCCGGGTATTTCTGGCAGCTTGTTGTCTGTCGGTTCCGATACCT
TAGCGGGAATGACAACGTTATGGGTTGAAGAGTTTAAGTCTTACTACCCGAACGTGAATGCTCAAGTTCAGGCTTCTGGT
TCATCCACTGCACCTCCTGCATTAACGGAAGGTACTGCTCACCTTGGGCCTATGAGTCGTCCAATGCGCCTACGAGAAGT
GGAAGCGTTCGAAAGGGAGCATGGCTATAAGCCGACGGCGCTTCGAGTTGCTATCGATGCGATTGGTCTTTTTGTGCATC
GTGATAATCCTATCGAGGGGCTTAATTTTCGCGAAATTGACAGCATATTTTCGGAGACATTGCGCTGTGGCGCGACTAAG
CCGCTAAACAATTGGCAAGATTTAGGTATCAGCCAGCCGTGGGCAAAACATAGATTCCAACTGTTCGGTCGTAATTCCGT
TTCGGGAACCTACGGCTACTTCAAACAAAACGCATTATGCAGTGGCGACTTCAAGAACCGAGTCAATGAACAGCCAGGCT
CAGCGTCGGTTGTACAGTCGGTCGCTTCATCAATCAGCGGGATAGGGTACTCAGGTATTGGTTATCGAGTGGCTGGTGTA
AAGTTAATTCCTATTGCGGAGCATGGTTCTGATTACGTAGAGCCTACTCGAGCGAATATTTTAAGCGGAGATTACCCTCT
ATCGCGCTTTCTCTATGTGTATGTGAATAAACACCCAGATAAACCGCTTTCTCCTGTAGAGAGAGAGTTCCTCACTTTTG
TATTCTCGAAGCAAGGGCAAGAACTGGTAGAGAAAGATGGCTATTTAGCGATACCGCCTGAGTTCGCGGAGCAAGAGTTG
GCAAAAGTCGGGCTCTGA

Upstream 100 bases:

>100_bases
AACATGCGCTTAGTCACCATGATTCACATTTAGAAATTCAAAGTGAAGTGGGTGTTGGTAGCCGATTCCATTTCACGCTA
CCTAGCCGATTGACAGTGTC

Downstream 100 bases:

>100_bases
TTGAGGCTAATACAAACTTAGAAAACGAACGTATGAACAGCTTGCTAAGTCGCAGGCTGTTTTTATTTTGACTGGTCGTT
ATTCTACCTTTAACGACCAT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: PBP [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSSLIRRMRFPISSLLALALVTPVHAEQSVDSLPDYSKVPGISGSLLSVGSDTLAGMTTLWVEEFKSYYPNVNAQVQASG
SSTAPPALTEGTAHLGPMSRPMRLREVEAFEREHGYKPTALRVAIDAIGLFVHRDNPIEGLNFREIDSIFSETLRCGATK
PLNNWQDLGISQPWAKHRFQLFGRNSVSGTYGYFKQNALCSGDFKNRVNEQPGSASVVQSVASSISGIGYSGIGYRVAGV
KLIPIAEHGSDYVEPTRANILSGDYPLSRFLYVYVNKHPDKPLSPVEREFLTFVFSKQGQELVEKDGYLAIPPEFAEQEL
AKVGL

Sequences:

>Translated_325_residues
MSSLIRRMRFPISSLLALALVTPVHAEQSVDSLPDYSKVPGISGSLLSVGSDTLAGMTTLWVEEFKSYYPNVNAQVQASG
SSTAPPALTEGTAHLGPMSRPMRLREVEAFEREHGYKPTALRVAIDAIGLFVHRDNPIEGLNFREIDSIFSETLRCGATK
PLNNWQDLGISQPWAKHRFQLFGRNSVSGTYGYFKQNALCSGDFKNRVNEQPGSASVVQSVASSISGIGYSGIGYRVAGV
KLIPIAEHGSDYVEPTRANILSGDYPLSRFLYVYVNKHPDKPLSPVEREFLTFVFSKQGQELVEKDGYLAIPPEFAEQEL
AKVGL
>Mature_324_residues
SSLIRRMRFPISSLLALALVTPVHAEQSVDSLPDYSKVPGISGSLLSVGSDTLAGMTTLWVEEFKSYYPNVNAQVQASGS
STAPPALTEGTAHLGPMSRPMRLREVEAFEREHGYKPTALRVAIDAIGLFVHRDNPIEGLNFREIDSIFSETLRCGATKP
LNNWQDLGISQPWAKHRFQLFGRNSVSGTYGYFKQNALCSGDFKNRVNEQPGSASVVQSVASSISGIGYSGIGYRVAGVK
LIPIAEHGSDYVEPTRANILSGDYPLSRFLYVYVNKHPDKPLSPVEREFLTFVFSKQGQELVEKDGYLAIPPEFAEQELA
KVGL

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35660; Mature: 35529

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLIRRMRFPISSLLALALVTPVHAEQSVDSLPDYSKVPGISGSLLSVGSDTLAGMTTL
CHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCHHHCCCCCCCHHHCCCHHHHHHHHH
WVEEFKSYYPNVNAQVQASGSSTAPPALTEGTAHLGPMSRPMRLREVEAFEREHGYKPTA
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
LRVAIDAIGLFVHRDNPIEGLNFREIDSIFSETLRCGATKPLNNWQDLGISQPWAKHRFQ
HHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHH
LFGRNSVSGTYGYFKQNALCSGDFKNRVNEQPGSASVVQSVASSISGIGYSGIGYRVAGV
HHCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECE
KLIPIAEHGSDYVEPTRANILSGDYPLSRFLYVYVNKHPDKPLSPVEREFLTFVFSKQGQ
EEEEECCCCCCCCCCCHHHHCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCH
ELVEKDGYLAIPPEFAEQELAKVGL
HHHHCCCCEECCHHHHHHHHHHCCC
>Mature Secondary Structure 
SSLIRRMRFPISSLLALALVTPVHAEQSVDSLPDYSKVPGISGSLLSVGSDTLAGMTTL
HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCHHHCCCCCCCHHHCCCHHHHHHHHH
WVEEFKSYYPNVNAQVQASGSSTAPPALTEGTAHLGPMSRPMRLREVEAFEREHGYKPTA
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
LRVAIDAIGLFVHRDNPIEGLNFREIDSIFSETLRCGATKPLNNWQDLGISQPWAKHRFQ
HHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHH
LFGRNSVSGTYGYFKQNALCSGDFKNRVNEQPGSASVVQSVASSISGIGYSGIGYRVAGV
HHCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECE
KLIPIAEHGSDYVEPTRANILSGDYPLSRFLYVYVNKHPDKPLSPVEREFLTFVFSKQGQ
EEEEECCCCCCCCCCCHHHHCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCH
ELVEKDGYLAIPPEFAEQELAKVGL
HHHHCCCCEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA