Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708598

Identifier: 218708598

GI number: 218708598

Start: 597764

End: 598072

Strand: Direct

Name: 218708598

Synonym: VS_0575

Alternate gene names: NA

Gene position: 597764-598072 (Clockwise)

Preceding gene: 218708597

Following gene: 218708602

Centisome position: 18.12

GC content: 37.86

Gene sequence:

>309_bases
ATGACTATGATTTGTGCAAAGGAATTTTCCGAATGGTTAAGACATAGGTTCAACGCTGAAAGCTCGGGTATTTCTATTTC
AAGAGCTGATATCAATCAGCTAACTGGCAGACAACGTTTAGACCCTAGCTTCGTAAATGATGTTCACTATGAATTAATGC
AGTATGGAATGGCATTTGTGACTGATACCAGTAGAGAAAACTTCTATCTTGTTCCGATAGCTCAGTCAATAAACTGGCGA
GAACGACTCGAATATCAATTTGAGAAAGAGATGTTCTGTAACATATATCCCATTGAAAAGTCGGGTTAA

Upstream 100 bases:

>100_bases
GTCAGGGATTGAGTGTTTTTTGGGGTGAAAGATGCGGCTTATACGCAGTATGCGAAATCAGAGTCTGATGCCCGTCGATA
GATAATTCAAGGATAAGACT

Downstream 100 bases:

>100_bases
AAAAAAGGTTCAACTTGATGATTAAGTTGAACCTTTTATCTTTTAGGTCAAGCCTTGAATGATGACAAACTTTTCTAATA
ATTCGTCGTCAGTTTCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MTMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFVTDTSRENFYLVPIAQSINWR
ERLEYQFEKEMFCNIYPIEKSG

Sequences:

>Translated_102_residues
MTMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFVTDTSRENFYLVPIAQSINWR
ERLEYQFEKEMFCNIYPIEKSG
>Mature_101_residues
TMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFVTDTSRENFYLVPIAQSINWRE
RLEYQFEKEMFCNIYPIEKSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12128; Mature: 11997

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFV
CCEEEHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEE
TDTSRENFYLVPIAQSINWRERLEYQFEKEMFCNIYPIEKSG
EECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC
>Mature Secondary Structure 
TMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFV
CEEEHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEE
TDTSRENFYLVPIAQSINWRERLEYQFEKEMFCNIYPIEKSG
EECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA