| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708598
Identifier: 218708598
GI number: 218708598
Start: 597764
End: 598072
Strand: Direct
Name: 218708598
Synonym: VS_0575
Alternate gene names: NA
Gene position: 597764-598072 (Clockwise)
Preceding gene: 218708597
Following gene: 218708602
Centisome position: 18.12
GC content: 37.86
Gene sequence:
>309_bases ATGACTATGATTTGTGCAAAGGAATTTTCCGAATGGTTAAGACATAGGTTCAACGCTGAAAGCTCGGGTATTTCTATTTC AAGAGCTGATATCAATCAGCTAACTGGCAGACAACGTTTAGACCCTAGCTTCGTAAATGATGTTCACTATGAATTAATGC AGTATGGAATGGCATTTGTGACTGATACCAGTAGAGAAAACTTCTATCTTGTTCCGATAGCTCAGTCAATAAACTGGCGA GAACGACTCGAATATCAATTTGAGAAAGAGATGTTCTGTAACATATATCCCATTGAAAAGTCGGGTTAA
Upstream 100 bases:
>100_bases GTCAGGGATTGAGTGTTTTTTGGGGTGAAAGATGCGGCTTATACGCAGTATGCGAAATCAGAGTCTGATGCCCGTCGATA GATAATTCAAGGATAAGACT
Downstream 100 bases:
>100_bases AAAAAAGGTTCAACTTGATGATTAAGTTGAACCTTTTATCTTTTAGGTCAAGCCTTGAATGATGACAAACTTTTCTAATA ATTCGTCGTCAGTTTCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFVTDTSRENFYLVPIAQSINWR ERLEYQFEKEMFCNIYPIEKSG
Sequences:
>Translated_102_residues MTMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFVTDTSRENFYLVPIAQSINWR ERLEYQFEKEMFCNIYPIEKSG >Mature_101_residues TMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFVTDTSRENFYLVPIAQSINWRE RLEYQFEKEMFCNIYPIEKSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12128; Mature: 11997
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFV CCEEEHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEE TDTSRENFYLVPIAQSINWRERLEYQFEKEMFCNIYPIEKSG EECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC >Mature Secondary Structure TMICAKEFSEWLRHRFNAESSGISISRADINQLTGRQRLDPSFVNDVHYELMQYGMAFV CEEEHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEE TDTSRENFYLVPIAQSINWRERLEYQFEKEMFCNIYPIEKSG EECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA