| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yfiL [C]
Identifier: 218708577
GI number: 218708577
Start: 565774
End: 566124
Strand: Direct
Name: yfiL [C]
Synonym: VS_0543
Alternate gene names: 218708577
Gene position: 565774-566124 (Clockwise)
Preceding gene: 218708573
Following gene: 218708580
Centisome position: 17.15
GC content: 45.87
Gene sequence:
>351_bases ATGAAAAAAATAATCGCATTATTCGCCGTGGCATTTAGCCTTGCAGGATGCAGCGCCAATGTTCAAGATTTAGCCGCCGA AGGCAATTGGCAAGAGATTGGCTATCGTGATGGTATCAAAGGCCACACTCAGCGTTCTTATTCAGATATGGCCGAGCTTG GCGGAGTCGATCAAGCTAGCTATACAGAAGGTTACCATTTAGGTGTGACTGAATATTGTAATCCGAACCATGCTTATCAG ATTGGTTTATCCGGTCAAGTGTATGAAGGCGTTTGTTCAGGTACGGAAGACGCTCAACGTTTCCGTATGGAATGGCAGCG CGGCTGGGATGAGTTTTCTAACGACTACTAA
Upstream 100 bases:
>100_bases ATAACAGACATAAGTGGACATCAGTCAGTGTTCAGCGGAGAATCGCCACAAAGGCAGCGCTTCGTCAGAAAGTGATGAAG TAACAATATAAAGGATTGAA
Downstream 100 bases:
>100_bases GCTCAAGCTAGCGATTAGAAATTAAAAAGACCAGTGCCGTATGTGTACTGGTCTTTTTGTATGTCGTTAAAGTAGCTGTC TAAATGAGAAGCCACAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MKKIIALFAVAFSLAGCSANVQDLAAEGNWQEIGYRDGIKGHTQRSYSDMAELGGVDQASYTEGYHLGVTEYCNPNHAYQ IGLSGQVYEGVCSGTEDAQRFRMEWQRGWDEFSNDY
Sequences:
>Translated_116_residues MKKIIALFAVAFSLAGCSANVQDLAAEGNWQEIGYRDGIKGHTQRSYSDMAELGGVDQASYTEGYHLGVTEYCNPNHAYQ IGLSGQVYEGVCSGTEDAQRFRMEWQRGWDEFSNDY >Mature_116_residues MKKIIALFAVAFSLAGCSANVQDLAAEGNWQEIGYRDGIKGHTQRSYSDMAELGGVDQASYTEGYHLGVTEYCNPNHAYQ IGLSGQVYEGVCSGTEDAQRFRMEWQRGWDEFSNDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12932; Mature: 12932
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIALFAVAFSLAGCSANVQDLAAEGNWQEIGYRDGIKGHTQRSYSDMAELGGVDQAS CHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC YTEGYHLGVTEYCNPNHAYQIGLSGQVYEGVCSGTEDAQRFRMEWQRGWDEFSNDY CCCCEECCCCCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKIIALFAVAFSLAGCSANVQDLAAEGNWQEIGYRDGIKGHTQRSYSDMAELGGVDQAS CHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC YTEGYHLGVTEYCNPNHAYQIGLSGQVYEGVCSGTEDAQRFRMEWQRGWDEFSNDY CCCCEECCCCCCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA