| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708553
Identifier: 218708553
GI number: 218708553
Start: 539097
End: 539411
Strand: Direct
Name: 218708553
Synonym: VS_0519
Alternate gene names: NA
Gene position: 539097-539411 (Clockwise)
Preceding gene: 218708552
Following gene: 218708554
Centisome position: 16.34
GC content: 36.19
Gene sequence:
>315_bases ATGTTATATGTAAATGAATATGCAACTGATATTTCAGGCGAATGCATTGTTTTAAAAATGTTAACCAATTATCGGTTGAA TAATATACTCACTTGGTTAGACTTTAACCGTGAAAGCAACGATTTAACAAAGACTTGTCTGCTTTTACGACCCCATTTCT TTTTGGATTTTTTAGTTAGCTTGGAGGCGCAAATGAAACATTTCGATTTTATACAGCATATTTGCGCGTCGTTTGATCCG TGTACTGACATGGTGACTGTTATGTCACAAGCATCAGCCATGGCCGATCGAAACACCCAAGATAAACCTAACTAA
Upstream 100 bases:
>100_bases CGTATCATACGTGGCTTTTTTGTTTCTGAAGGATAGTCCGCTGTTCTATAGAGAGAGCCCTAAGATAGATATGCTGTGAT TTTATATAATCATAGTGAAT
Downstream 100 bases:
>100_bases TAGATCCGTACCCTTATTTGGCTGCGGAAAAATAGCAGCTAAGTGAGAAGCCCTCATACGATCTAACACGCTATTTTTCC TCAGTTGATTCAACAACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVSLEAQMKHFDFIQHICASFDP CTDMVTVMSQASAMADRNTQDKPN
Sequences:
>Translated_104_residues MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVSLEAQMKHFDFIQHICASFDP CTDMVTVMSQASAMADRNTQDKPN >Mature_104_residues MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVSLEAQMKHFDFIQHICASFDP CTDMVTVMSQASAMADRNTQDKPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12089; Mature: 12089
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVS CEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LEAQMKHFDFIQHICASFDPCTDMVTVMSQASAMADRNTQDKPN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLYVNEYATDISGECIVLKMLTNYRLNNILTWLDFNRESNDLTKTCLLLRPHFFLDFLVS CEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LEAQMKHFDFIQHICASFDPCTDMVTVMSQASAMADRNTQDKPN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA