| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708396
Identifier: 218708396
GI number: 218708396
Start: 358912
End: 359079
Strand: Direct
Name: 218708396
Synonym: VS_0356
Alternate gene names: NA
Gene position: 358912-359079 (Clockwise)
Preceding gene: 218708392
Following gene: 218708398
Centisome position: 10.88
GC content: 30.36
Gene sequence:
>168_bases TTGGAAACGGCACCTTTTTCAATCCATGTGATGAAAAAGTGGCTGAATAATATCAAAAATTGGCAGAAAATTACTCAAAT GTTAAAAGATATAGCGAAAAAATCTAACAAATTACGGTTGGATCTCGTGTTTGATTTGCTATTGAGTTTTTTAAAATCAA TGAGTTAG
Upstream 100 bases:
>100_bases ATAGCCCCAACTTTAATCAGTTTGGTAAATGCCATGAATTTCCCTTCCTTTATTCATTATTAACCCTGAAACAAGTGTAG TCGTTTCTGGAGTTTCCTAT
Downstream 100 bases:
>100_bases TGATTTTTGGGGGAGGCGGGATAGATATCTTAGGATGTGATTTGGATCACGAACTAAATAGGTGTTTGTGATCCAATAGT AATGGCTGATAGTTATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues METAPFSIHVMKKWLNNIKNWQKITQMLKDIAKKSNKLRLDLVFDLLLSFLKSMS
Sequences:
>Translated_55_residues METAPFSIHVMKKWLNNIKNWQKITQMLKDIAKKSNKLRLDLVFDLLLSFLKSMS >Mature_55_residues METAPFSIHVMKKWLNNIKNWQKITQMLKDIAKKSNKLRLDLVFDLLLSFLKSMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6537; Mature: 6537
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METAPFSIHVMKKWLNNIKNWQKITQMLKDIAKKSNKLRLDLVFDLLLSFLKSMS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure METAPFSIHVMKKWLNNIKNWQKITQMLKDIAKKSNKLRLDLVFDLLLSFLKSMS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA