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The map label for this gene is epsH [H]

Identifier: 218708283

GI number: 218708283

Start: 216124

End: 217053

Strand: Direct

Name: epsH [H]

Synonym: VS_0221

Alternate gene names: 218708283

Gene position: 216124-217053 (Clockwise)

Preceding gene: 218708282

Following gene: 218708284

Centisome position: 6.55

GC content: 31.08

Gene sequence:

>930_bases
ATGCAAAAAATAAATTTAAGTATCATTATACCTGTTTATAACTTGGAAGATCTTGTTGTCAATTGTTTAAATAGTGTATT
TAATCAAAATACGTCATATAATTATGAGGTAATTGTCATTGATGATGGTTCGACAGATTGCAGTTTACTTCGAATTAATG
AGTTTAATAAAAGAAGTAATGTAAAAATATTTAGCCAAAAAAATGCAGGACTATCCGCAACAAGAAACGTAGGAATAACT
CAGGCAGTAGGTGAATATATTTCTTTCGTTGATGCAGATGATACTATTTCCCCCGAATTTGTTGAAAAAACACTTAGAAA
AGCTTACCTTGAAAAAAGTGATATGGTAATCTTTGGAATTATGCGTGTTGAGGATAATGTAACTACCCCATTTTATTTAC
CGAATAAAAACTCTGATCTATTTACCCAGGTGCTAAATAATGCATTTGCTTGGAATAAAATATATAAAAAAGATTTACTA
TCAGGTAATGACTTTATAGAAGGGGTTTGGTATGAAGATTTATCAATAACACCAATCATACTTCTAAAAGCTGTCAATGT
AACTATTCTTCCTGAATATCTTTACTATTATCTTTCACGACCGGCATCAATAACGCAAACAGTTGACAACCCATTAATGT
TAAATTTCATTGATGCTCTCATTAATGTGAATGCATATATTCAAGGACTTCCTGAATCGGAACAAGTAAAAAGTGAGTTT
AAAGATTTCAAAAATAAGGCCAAAAATACCTTCTTATTACGAATGCTATCTGGGTGCTCTCGCCGGTTTATCTGGAAGGA
GTTGCCGAATATAGTGTTGAAGTTTCGGGAATTAGATGCGTGGAAAACATTTGATTACTGGAAAGTCATATTTTCATTTT
GTGTTAATAAACATAAGTTAAAAGCGATAGCAAAAAAAATTAAGAGTTAG

Upstream 100 bases:

>100_bases
TTAAAATATTTAGGACATTATCTTGGTCATTTATTCTTATGATGATTGTTATGTTAATTGTCATATTGATTGTTTCATTT
TTAAAAACTAGAGTCCCGGA

Downstream 100 bases:

>100_bases
TATATGCAATACATAAAATATAAGCTTAGTAATTTTAAGAGTTTTCTTTTGCGTTTTCTTTTTAATTTAAATATGTATTT
TAGAAAATTACTTAGATATC

Product: putative glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MQKINLSIIIPVYNLEDLVVNCLNSVFNQNTSYNYEVIVIDDGSTDCSLLRINEFNKRSNVKIFSQKNAGLSATRNVGIT
QAVGEYISFVDADDTISPEFVEKTLRKAYLEKSDMVIFGIMRVEDNVTTPFYLPNKNSDLFTQVLNNAFAWNKIYKKDLL
SGNDFIEGVWYEDLSITPIILLKAVNVTILPEYLYYYLSRPASITQTVDNPLMLNFIDALINVNAYIQGLPESEQVKSEF
KDFKNKAKNTFLLRMLSGCSRRFIWKELPNIVLKFRELDAWKTFDYWKVIFSFCVNKHKLKAIAKKIKS

Sequences:

>Translated_309_residues
MQKINLSIIIPVYNLEDLVVNCLNSVFNQNTSYNYEVIVIDDGSTDCSLLRINEFNKRSNVKIFSQKNAGLSATRNVGIT
QAVGEYISFVDADDTISPEFVEKTLRKAYLEKSDMVIFGIMRVEDNVTTPFYLPNKNSDLFTQVLNNAFAWNKIYKKDLL
SGNDFIEGVWYEDLSITPIILLKAVNVTILPEYLYYYLSRPASITQTVDNPLMLNFIDALINVNAYIQGLPESEQVKSEF
KDFKNKAKNTFLLRMLSGCSRRFIWKELPNIVLKFRELDAWKTFDYWKVIFSFCVNKHKLKAIAKKIKS
>Mature_309_residues
MQKINLSIIIPVYNLEDLVVNCLNSVFNQNTSYNYEVIVIDDGSTDCSLLRINEFNKRSNVKIFSQKNAGLSATRNVGIT
QAVGEYISFVDADDTISPEFVEKTLRKAYLEKSDMVIFGIMRVEDNVTTPFYLPNKNSDLFTQVLNNAFAWNKIYKKDLL
SGNDFIEGVWYEDLSITPIILLKAVNVTILPEYLYYYLSRPASITQTVDNPLMLNFIDALINVNAYIQGLPESEQVKSEF
KDFKNKAKNTFLLRMLSGCSRRFIWKELPNIVLKFRELDAWKTFDYWKVIFSFCVNKHKLKAIAKKIKS

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=224, Percent_Identity=29.4642857142857, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35655; Mature: 35655

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKINLSIIIPVYNLEDLVVNCLNSVFNQNTSYNYEVIVIDDGSTDCSLLRINEFNKRSN
CCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCC
VKIFSQKNAGLSATRNVGITQAVGEYISFVDADDTISPEFVEKTLRKAYLEKSDMVIFGI
EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
MRVEDNVTTPFYLPNKNSDLFTQVLNNAFAWNKIYKKDLLSGNDFIEGVWYEDLSITPII
EEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHH
LLKAVNVTILPEYLYYYLSRPASITQTVDNPLMLNFIDALINVNAYIQGLPESEQVKSEF
HHHHCCCEEHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHH
KDFKNKAKNTFLLRMLSGCSRRFIWKELPNIVLKFRELDAWKTFDYWKVIFSFCVNKHKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHH
KAIAKKIKS
HHHHHHHCC
>Mature Secondary Structure
MQKINLSIIIPVYNLEDLVVNCLNSVFNQNTSYNYEVIVIDDGSTDCSLLRINEFNKRSN
CCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCC
VKIFSQKNAGLSATRNVGITQAVGEYISFVDADDTISPEFVEKTLRKAYLEKSDMVIFGI
EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
MRVEDNVTTPFYLPNKNSDLFTQVLNNAFAWNKIYKKDLLSGNDFIEGVWYEDLSITPII
EEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHH
LLKAVNVTILPEYLYYYLSRPASITQTVDNPLMLNFIDALINVNAYIQGLPESEQVKSEF
HHHHCCCEEHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHH
KDFKNKAKNTFLLRMLSGCSRRFIWKELPNIVLKFRELDAWKTFDYWKVIFSFCVNKHKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHH
KAIAKKIKS
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]