Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708284

Identifier: 218708284

GI number: 218708284

Start: 217057

End: 217848

Strand: Direct

Name: 218708284

Synonym: VS_0222

Alternate gene names: NA

Gene position: 217057-217848 (Clockwise)

Preceding gene: 218708283

Following gene: 218708285

Centisome position: 6.58

GC content: 26.89

Gene sequence:

>792_bases
ATGCAATACATAAAATATAAGCTTAGTAATTTTAAGAGTTTTCTTTTGCGTTTTCTTTTTAATTTAAATATGTATTTTAG
AAAATTACTTAGATATCACTTTAAATATAATAAAATTAAGAATCTGAAAAATCAACACACTAATAAGAGATGTTTTATTA
TTGGTAATGGCCCTAGTTTGACAAAAGAAATTTTAATATCCTTAAAAAAAGAAAAAACTTTTGGCGTTAATGCCATCTGT
AAATGGTTTCCTGAATTAGGGTTCGAAACTACATATTATGGGATACAGGACATTAGAGCTTTTAATGCTCTTAAGGAAGA
TATTCTTAAGATATCAAAAAGTAAAATGCTAATGACGTCTAAAATTTCTCGAAAATACGGAAATGAAGATAGGACTTATG
TCTTTCCTTTAAACTATTTAAATCATAATACATATCATGATGATTTTGGCTCCAAAGTATCAAAAGATGTAGAACAAGTT
GTTTATGACGGTTATTCGATTAATTACTCTATGATTCAGATTGCCATGTATATGGGGTTTACAGAAATTTATCTGATTGG
AATGGATTGTAATTATAATTTTGAAGATGTTGAAAATCAATATTCAGTTAACCACTTTATAGCTCAAGAAAACCCCTCTT
TAGCTGGTTATAAAATGATTCAAGCCTTAAAGGCTATAAAGCATGAGATTGACAAAGAAAATGGAATAAAGATCTTTGAT
TGTAGTATAAATGGAAAGTTAGATTTGTTCCCTAAACAAGAATTAGAAGATATATTGAACAATGATAAATAA

Upstream 100 bases:

>100_bases
AGATGCGTGGAAAACATTTGATTACTGGAAAGTCATATTTTCATTTTGTGTTAATAAACATAAGTTAAAAGCGATAGCAA
AAAAAATTAAGAGTTAGTAT

Downstream 100 bases:

>100_bases
TAAATTAATTCGCCATGGAGGTATCAATGTATTAGGTGCCATGCTTATTCAAGGAATTAATTTTTTATCCTTACCTTTGT
TTATACAAATTTTAAGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQYIKYKLSNFKSFLLRFLFNLNMYFRKLLRYHFKYNKIKNLKNQHTNKRCFIIGNGPSLTKEILISLKKEKTFGVNAIC
KWFPELGFETTYYGIQDIRAFNALKEDILKISKSKMLMTSKISRKYGNEDRTYVFPLNYLNHNTYHDDFGSKVSKDVEQV
VYDGYSINYSMIQIAMYMGFTEIYLIGMDCNYNFEDVENQYSVNHFIAQENPSLAGYKMIQALKAIKHEIDKENGIKIFD
CSINGKLDLFPKQELEDILNNDK

Sequences:

>Translated_263_residues
MQYIKYKLSNFKSFLLRFLFNLNMYFRKLLRYHFKYNKIKNLKNQHTNKRCFIIGNGPSLTKEILISLKKEKTFGVNAIC
KWFPELGFETTYYGIQDIRAFNALKEDILKISKSKMLMTSKISRKYGNEDRTYVFPLNYLNHNTYHDDFGSKVSKDVEQV
VYDGYSINYSMIQIAMYMGFTEIYLIGMDCNYNFEDVENQYSVNHFIAQENPSLAGYKMIQALKAIKHEIDKENGIKIFD
CSINGKLDLFPKQELEDILNNDK
>Mature_263_residues
MQYIKYKLSNFKSFLLRFLFNLNMYFRKLLRYHFKYNKIKNLKNQHTNKRCFIIGNGPSLTKEILISLKKEKTFGVNAIC
KWFPELGFETTYYGIQDIRAFNALKEDILKISKSKMLMTSKISRKYGNEDRTYVFPLNYLNHNTYHDDFGSKVSKDVEQV
VYDGYSINYSMIQIAMYMGFTEIYLIGMDCNYNFEDVENQYSVNHFIAQENPSLAGYKMIQALKAIKHEIDKENGIKIFD
CSINGKLDLFPKQELEDILNNDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31098; Mature: 31098

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYIKYKLSNFKSFLLRFLFNLNMYFRKLLRYHFKYNKIKNLKNQHTNKRCFIIGNGPSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHH
TKEILISLKKEKTFGVNAICKWFPELGFETTYYGIQDIRAFNALKEDILKISKSKMLMTS
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISRKYGNEDRTYVFPLNYLNHNTYHDDFGSKVSKDVEQVVYDGYSINYSMIQIAMYMGF
HHHHHHCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
TEIYLIGMDCNYNFEDVENQYSVNHFIAQENPSLAGYKMIQALKAIKHEIDKENGIKIFD
EEEEEEEECCCCCHHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
CSINGKLDLFPKQELEDILNNDK
ECCCCEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MQYIKYKLSNFKSFLLRFLFNLNMYFRKLLRYHFKYNKIKNLKNQHTNKRCFIIGNGPSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHH
TKEILISLKKEKTFGVNAICKWFPELGFETTYYGIQDIRAFNALKEDILKISKSKMLMTS
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISRKYGNEDRTYVFPLNYLNHNTYHDDFGSKVSKDVEQVVYDGYSINYSMIQIAMYMGF
HHHHHHCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
TEIYLIGMDCNYNFEDVENQYSVNHFIAQENPSLAGYKMIQALKAIKHEIDKENGIKIFD
EEEEEEEECCCCCHHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
CSINGKLDLFPKQELEDILNNDK
ECCCCEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA