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The map label for this gene is waaP [H]

Identifier: 218708255

GI number: 218708255

Start: 187516

End: 188238

Strand: Reverse

Name: waaP [H]

Synonym: VS_0192

Alternate gene names: 218708255

Gene position: 188238-187516 (Counterclockwise)

Preceding gene: 218708262

Following gene: 218708244

Centisome position: 5.71

GC content: 39.56

Gene sequence:

>723_bases
ATGTTTACAACAAAGCAAATCCATAAAACAACGTACTGGTATAATCCTAAATTACTCACCGAAGACGTTGAATTGGCTTT
TTCTGTGGATTATTGGAAGGCGAATCAAGCAATGCTGGGGCACGCTCAAGGTAGAGGAACAACATGGTTTGTTAAGGGAG
AAAAAAGCAATTTCGCTCTTCGACATTATCATCGCGGCGGCTTGTTTGGAAAGCTAGTTAGAGACAGCTATTTATTTACT
GGATTAGAGAACTCACGAGCATACCAAGAGCTAATGTTACTTGAGCTTCTAGCCACACATAAAGTTAATGTCCCGACACC
CGTTGCTGCGAAAGTTTCGCAAGAAGGGCTCGTTTACAAAGCCGATATTTTAATTGAAAAGATTTCCGACGCAGAAGACT
TAGTAAAGATACTATCAAACAAAAAACTATCCGATTCCCATTTCAACGATATTGGTCATCAAATTCGAAAAATGCACGAT
GCCGGGGTCAATCATACCGACCTCAATATCCATAACATTCTCGTTGATAAAGCAGGCAAGGTTTGGATTATCGATTTTGA
TAAATGCCTAACGCAAACAGGTAATAGCTGGAAAGAGAGTAATTTAAAGCGACTTAAGCGCTCATTCGAAAAAGAAGTTC
GATTAGGAAGGATTGATGCTCAGCACTTTGATTTTTCACAAATTGAACAAGGGTACAAAGTGAGTACCCTTGAGAGTCTA
TGA

Upstream 100 bases:

>100_bases
ATTTTTTGGTAACTACATGAATCGTTCATTAATCTGTTCGGCGTTTGATATACTGTTCTACCAAGTATGCCATAAACTCC
CCAATACGAGACAGTGATTC

Downstream 100 bases:

>100_bases
TTTATTCTTCTTTCAAACCAAATAACTTACGAAGTTTCTTTTTCTTTTTATAGATATGCCCTCGAATCACTTCAGCAAGA
GGGCGCTTGAAGGACACTTC

Product: 3-deoxy-D-manno-octulosonic acid kinase

Products: NA

Alternate protein names: KDO kinase [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MFTTKQIHKTTYWYNPKLLTEDVELAFSVDYWKANQAMLGHAQGRGTTWFVKGEKSNFALRHYHRGGLFGKLVRDSYLFT
GLENSRAYQELMLLELLATHKVNVPTPVAAKVSQEGLVYKADILIEKISDAEDLVKILSNKKLSDSHFNDIGHQIRKMHD
AGVNHTDLNIHNILVDKAGKVWIIDFDKCLTQTGNSWKESNLKRLKRSFEKEVRLGRIDAQHFDFSQIEQGYKVSTLESL

Sequences:

>Translated_240_residues
MFTTKQIHKTTYWYNPKLLTEDVELAFSVDYWKANQAMLGHAQGRGTTWFVKGEKSNFALRHYHRGGLFGKLVRDSYLFT
GLENSRAYQELMLLELLATHKVNVPTPVAAKVSQEGLVYKADILIEKISDAEDLVKILSNKKLSDSHFNDIGHQIRKMHD
AGVNHTDLNIHNILVDKAGKVWIIDFDKCLTQTGNSWKESNLKRLKRSFEKEVRLGRIDAQHFDFSQIEQGYKVSTLESL
>Mature_240_residues
MFTTKQIHKTTYWYNPKLLTEDVELAFSVDYWKANQAMLGHAQGRGTTWFVKGEKSNFALRHYHRGGLFGKLVRDSYLFT
GLENSRAYQELMLLELLATHKVNVPTPVAAKVSQEGLVYKADILIEKISDAEDLVKILSNKKLSDSHFNDIGHQIRKMHD
AGVNHTDLNIHNILVDKAGKVWIIDFDKCLTQTGNSWKESNLKRLKRSFEKEVRLGRIDAQHFDFSQIEQGYKVSTLESL

Specific function: ATP-dependent phosphorylation of 3-deoxy-D-manno- octulosonic acid at the 4-OH position [H]

COG id: COG0515

COG function: function code RTKL; Serine/threonine protein kinase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein kinase superfamily. KdkA/rfaP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022826
- InterPro:   IPR011009
- InterPro:   IPR010440
- InterPro:   IPR000719 [H]

Pfam domain/function: PF06293 Kdo [H]

EC number: NA

Molecular weight: Translated: 27582; Mature: 27582

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTTKQIHKTTYWYNPKLLTEDVELAFSVDYWKANQAMLGHAQGRGTTWFVKGEKSNFAL
CCCCHHHHHEEEEECCEEECCCEEEEEEEEHEECCCHHEECCCCCCEEEEEECCCCCEEE
RHYHRGGLFGKLVRDSYLFTGLENSRAYQELMLLELLATHKVNVPTPVAAKVSQEGLVYK
EEECCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEE
ADILIEKISDAEDLVKILSNKKLSDSHFNDIGHQIRKMHDAGVNHTDLNIHNILVDKAGK
HHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
VWIIDFDKCLTQTGNSWKESNLKRLKRSFEKEVRLGRIDAQHFDFSQIEQGYKVSTLESL
EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHCC
>Mature Secondary Structure
MFTTKQIHKTTYWYNPKLLTEDVELAFSVDYWKANQAMLGHAQGRGTTWFVKGEKSNFAL
CCCCHHHHHEEEEECCEEECCCEEEEEEEEHEECCCHHEECCCCCCEEEEEECCCCCEEE
RHYHRGGLFGKLVRDSYLFTGLENSRAYQELMLLELLATHKVNVPTPVAAKVSQEGLVYK
EEECCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEE
ADILIEKISDAEDLVKILSNKKLSDSHFNDIGHQIRKMHDAGVNHTDLNIHNILVDKAGK
HHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
VWIIDFDKCLTQTGNSWKESNLKRLKRSFEKEVRLGRIDAQHFDFSQIEQGYKVSTLESL
EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]