| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is WaaN [H]
Identifier: 218708262
GI number: 218708262
Start: 193561
End: 194514
Strand: Reverse
Name: WaaN [H]
Synonym: VS_0199
Alternate gene names: 218708262
Gene position: 194514-193561 (Counterclockwise)
Preceding gene: 218708263
Following gene: 218708255
Centisome position: 5.9
GC content: 43.82
Gene sequence:
>954_bases GTGACAACTCAACGCGACGACTACGATCCTAAAGCATACAACCCCAAATTCATCAGTGCGTTTTTATCACCAAAACACTG GGGAACTTGGCTCGGGCTATGCCTATGTCTACCCATTTCTTTGCTGCCAAACTCGATTCGAGTAGCCATAGCAAAATTCG TGGCGACAAAAATGGCGAAGAAGCAACGTGGCTCAGTACAAAAGGCACGTATAAACCTCGCGCTTTGTTTTCCAGAAAAG TCTGTTCAAGAGCGTGAAACCATTCTAACCAATTGCCTAACAACTGCTGGCGCCTTTTTACTTGGTTTTCCTGCCATATC ATTACGCAGTAAACGTTGGCTTGAAAAACACTCAGAAATCATTGGATTAGAACACTTACAACAGCTACAAAAAGACAATC AAAGTGCCATTTTGCTCGTACCTCACTCTTGGTGCATCGACATTCCGGCTATCCTTTTAGCTTCAAGAGGCTTACCCGTT TCTGCGATGGCAAATAGCCAGAAAAACCCTCTGACCGATTGGCTCATGCACAAGCAAAGAGTTCAGTATGGCGGACGAGT TTATGATCGCAGTGGAGGCATTAAGCCATTTATCAAATCAGTCAAAGATGGCTACTTGGGATATTACCTGCCAGATCAAG ACCATGGCCCAGAGCAAAGTGTATTCTCAGATTTCTTTGCGACTGAAAAAGCAACCTTGCCCGGACTTGGAAAACTAGCA AAAGTAAGCCGAGCGAAGATCGTTCCAACCTTTGCCAGCTATAATATTGAGACGGGTAAATACGAAATTGAAATCAAAGC ACCCATTGAGTTATCCGGCGATGAACATCAAGACGCTAGGGCAATGAATGAAGTCGTTGAAGGTTTTGTTAATCCGAAAC CTGAGCAGTACATGTGGATTTTAAAGTTGTTAAAAACACGCAGGAATGGACAAGACCCATATGTGGGGTATTAA
Upstream 100 bases:
>100_bases GTACATGCAGTCAGTTAATCGCTAGATTACACTCTCCCGAAAACAAGCTAACGGTATACTGTTAGCTTGTTCAATATATA TCGCCAGTTAAAGGTTTACA
Downstream 100 bases:
>100_bases CCTACATATGGGTATAAACCTACACGTAGGCATATAGACCCGATTGATTAGTTAGAAGTTTCTAACTAATCAATAACTTA AAATCTTTGATATTAATAAA
Product: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTTQRDDYDPKAYNPKFISAFLSPKHWGTWLGLCLCLPISLLPNSIRVAIAKFVATKMAKKQRGSVQKARINLALCFPEK SVQERETILTNCLTTAGAFLLGFPAISLRSKRWLEKHSEIIGLEHLQQLQKDNQSAILLVPHSWCIDIPAILLASRGLPV SAMANSQKNPLTDWLMHKQRVQYGGRVYDRSGGIKPFIKSVKDGYLGYYLPDQDHGPEQSVFSDFFATEKATLPGLGKLA KVSRAKIVPTFASYNIETGKYEIEIKAPIELSGDEHQDARAMNEVVEGFVNPKPEQYMWILKLLKTRRNGQDPYVGY
Sequences:
>Translated_317_residues MTTQRDDYDPKAYNPKFISAFLSPKHWGTWLGLCLCLPISLLPNSIRVAIAKFVATKMAKKQRGSVQKARINLALCFPEK SVQERETILTNCLTTAGAFLLGFPAISLRSKRWLEKHSEIIGLEHLQQLQKDNQSAILLVPHSWCIDIPAILLASRGLPV SAMANSQKNPLTDWLMHKQRVQYGGRVYDRSGGIKPFIKSVKDGYLGYYLPDQDHGPEQSVFSDFFATEKATLPGLGKLA KVSRAKIVPTFASYNIETGKYEIEIKAPIELSGDEHQDARAMNEVVEGFVNPKPEQYMWILKLLKTRRNGQDPYVGY >Mature_316_residues TTQRDDYDPKAYNPKFISAFLSPKHWGTWLGLCLCLPISLLPNSIRVAIAKFVATKMAKKQRGSVQKARINLALCFPEKS VQERETILTNCLTTAGAFLLGFPAISLRSKRWLEKHSEIIGLEHLQQLQKDNQSAILLVPHSWCIDIPAILLASRGLPVS AMANSQKNPLTDWLMHKQRVQYGGRVYDRSGGIKPFIKSVKDGYLGYYLPDQDHGPEQSVFSDFFATEKATLPGLGKLAK VSRAKIVPTFASYNIETGKYEIEIKAPIELSGDEHQDARAMNEVVEGFVNPKPEQYMWILKLLKTRRNGQDPYVGY
Specific function: Transfers myristate or laurate, activated on ACP, to (KDO)2-(lauroyl)-lipid IVA [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI1788161, Length=317, Percent_Identity=44.1640378548896, Blast_Score=286, Evalue=1e-78, Organism=Escherichia coli, GI1787292, Length=300, Percent_Identity=31.3333333333333, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI87082094, Length=304, Percent_Identity=28.2894736842105, Blast_Score=119, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011921 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 35681; Mature: 35550
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQRDDYDPKAYNPKFISAFLSPKHWGTWLGLCLCLPISLLPNSIRVAIAKFVATKMAK CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KQRGSVQKARINLALCFPEKSVQERETILTNCLTTAGAFLLGFPAISLRSKRWLEKHSEI HHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IGLEHLQQLQKDNQSAILLVPHSWCIDIPAILLASRGLPVSAMANSQKNPLTDWLMHKQR HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHH VQYGGRVYDRSGGIKPFIKSVKDGYLGYYLPDQDHGPEQSVFSDFFATEKATLPGLGKLA HHHCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH KVSRAKIVPTFASYNIETGKYEIEIKAPIELSGDEHQDARAMNEVVEGFVNPKPEQYMWI HHHHHHEEEEHHCCCEECCEEEEEEECCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHH LKLLKTRRNGQDPYVGY HHHHHHHCCCCCCCCCC >Mature Secondary Structure TTQRDDYDPKAYNPKFISAFLSPKHWGTWLGLCLCLPISLLPNSIRVAIAKFVATKMAK CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KQRGSVQKARINLALCFPEKSVQERETILTNCLTTAGAFLLGFPAISLRSKRWLEKHSEI HHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IGLEHLQQLQKDNQSAILLVPHSWCIDIPAILLASRGLPVSAMANSQKNPLTDWLMHKQR HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHH VQYGGRVYDRSGGIKPFIKSVKDGYLGYYLPDQDHGPEQSVFSDFFATEKATLPGLGKLA HHHCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH KVSRAKIVPTFASYNIETGKYEIEIKAPIELSGDEHQDARAMNEVVEGFVNPKPEQYMWI HHHHHHEEEEHHCCCEECCEEEEEEECCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHH LKLLKTRRNGQDPYVGY HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]