| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is cysQ [H]
Identifier: 218708210
GI number: 218708210
Start: 140080
End: 140907
Strand: Reverse
Name: cysQ [H]
Synonym: VS_0146
Alternate gene names: 218708210
Gene position: 140907-140080 (Counterclockwise)
Preceding gene: 218708211
Following gene: 218708197
Centisome position: 4.27
GC content: 47.95
Gene sequence:
>828_bases ATGCCAATAACAAAAGATTTGTCTCACCTGCTGCCCTCTGTCATTGAGATTGCTCGCTCTGCTGGGCAACTGATCTTAGA GATCTACGAGAAAAAAGATTACGAAGAGTTTACCAAGAGTGATGATACGCCCGTCACTAGTGCTGATCTCGCCGCTCATA AACTGATCTCGAAAAAACTTAGCGAACTGACACCTGATATTCCGGTGTTATCGGAAGAAGCCGCTGATATCAGCCTAGAG CAACGTTCTCAATGGGATCGCTACTGGTTGGTTGACCCGCTGGACGGTACACAGGAGTTCATCGCACGAAGTGGCGATTT CGCGACAATCATAGCCCTAATCGAACACAACAAGCCGGTAATGGGCGTCGTGTACGCACCGGTTTCAGGTGTGAGTTATT ACGCTTACAGTGGTAAAGGTGCATGGAAAATTCCAGACCTTAATGACAGCGTTAAAATCAAAACGCACCGTCACGAGCTA CCAAACCAATCGATCACGATGGCAATCAGCCGTCGCCAAGACATCAATCGAATCACTAACCGTATGAGCTCTGCTTGGAA CTACGACTTAGTTCCTCTTGGCTCTGCTGCGCTTAAGGCATGTTTAGTCGCAGAAGGTACTGTGGACTGTTATCTACGTA TTGGACCAACCGGAGAGTGGGATACCGCAGCAACCCAGTGCATTGTTGAAGAAGCTGGCGGACGAATCTTAAGTACCCAG TTAGAGCCGCTTTCGTACAATGAAAGAGAGACGCTTGAGAACCCGAACTTCATTGTGCTTGGTGATGCTGACTTACCGTG GGCAGAAATCTTACAAGGTAAAGACTAG
Upstream 100 bases:
>100_bases CTTCTGTGAGGCTCGCAGTATTACCGCCCTACTATTAGCCCTTCGCGTATTAAACAATAATTAAAACAGTCAGAATCACT CGAAGAGTAAGAGAATATTT
Downstream 100 bases:
>100_bases GCTTACTTGCTCTCTTTAACCGTCAGATATCCTCTAGATTCTCAGAAAAAATAAAACGGGCACCTCACTGAGGTGCCCGT TTTATTTATATTTCGTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MPITKDLSHLLPSVIEIARSAGQLILEIYEKKDYEEFTKSDDTPVTSADLAAHKLISKKLSELTPDIPVLSEEAADISLE QRSQWDRYWLVDPLDGTQEFIARSGDFATIIALIEHNKPVMGVVYAPVSGVSYYAYSGKGAWKIPDLNDSVKIKTHRHEL PNQSITMAISRRQDINRITNRMSSAWNYDLVPLGSAALKACLVAEGTVDCYLRIGPTGEWDTAATQCIVEEAGGRILSTQ LEPLSYNERETLENPNFIVLGDADLPWAEILQGKD
Sequences:
>Translated_275_residues MPITKDLSHLLPSVIEIARSAGQLILEIYEKKDYEEFTKSDDTPVTSADLAAHKLISKKLSELTPDIPVLSEEAADISLE QRSQWDRYWLVDPLDGTQEFIARSGDFATIIALIEHNKPVMGVVYAPVSGVSYYAYSGKGAWKIPDLNDSVKIKTHRHEL PNQSITMAISRRQDINRITNRMSSAWNYDLVPLGSAALKACLVAEGTVDCYLRIGPTGEWDTAATQCIVEEAGGRILSTQ LEPLSYNERETLENPNFIVLGDADLPWAEILQGKD >Mature_274_residues PITKDLSHLLPSVIEIARSAGQLILEIYEKKDYEEFTKSDDTPVTSADLAAHKLISKKLSELTPDIPVLSEEAADISLEQ RSQWDRYWLVDPLDGTQEFIARSGDFATIIALIEHNKPVMGVVYAPVSGVSYYAYSGKGAWKIPDLNDSVKIKTHRHELP NQSITMAISRRQDINRITNRMSSAWNYDLVPLGSAALKACLVAEGTVDCYLRIGPTGEWDTAATQCIVEEAGGRILSTQL EPLSYNERETLENPNFIVLGDADLPWAEILQGKD
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=254, Percent_Identity=27.1653543307087, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI221625487, Length=254, Percent_Identity=27.1653543307087, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI7657236, Length=241, Percent_Identity=26.9709543568465, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1790659, Length=252, Percent_Identity=43.6507936507937, Blast_Score=181, Evalue=3e-47, Organism=Escherichia coli, GI1788882, Length=230, Percent_Identity=31.304347826087, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193202572, Length=262, Percent_Identity=26.3358778625954, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI193202570, Length=267, Percent_Identity=27.3408239700375, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71995905, Length=288, Percent_Identity=22.5694444444444, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71995897, Length=288, Percent_Identity=22.5694444444444, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6320493, Length=254, Percent_Identity=29.9212598425197, Blast_Score=79, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6321836, Length=223, Percent_Identity=27.8026905829596, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24664922, Length=230, Percent_Identity=28.695652173913, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24664926, Length=231, Percent_Identity=27.7056277056277, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24641722, Length=277, Percent_Identity=21.2996389891697, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 30548; Mature: 30417
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITKDLSHLLPSVIEIARSAGQLILEIYEKKDYEEFTKSDDTPVTSADLAAHKLISKKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHH SELTPDIPVLSEEAADISLEQRSQWDRYWLVDPLDGTQEFIARSGDFATIIALIEHNKPV HHHCCCCCCCCCHHHCCCHHHHCCCCCEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCE MGVVYAPVSGVSYYAYSGKGAWKIPDLNDSVKIKTHRHELPNQSITMAISRRQDINRITN EEEEECCCCCCEEEEECCCCCEECCCCCCCEEEEEHHHHCCCCCEEEEEHHHHHHHHHHH RMSSAWNYDLVPLGSAALKACLVAEGTVDCYLRIGPTGEWDTAATQCIVEEAGGRILSTQ HHHHCCCCCEEECCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEE LEPLSYNERETLENPNFIVLGDADLPWAEILQGKD CCCCCCCCHHHCCCCCEEEEECCCCCHHHHHCCCC >Mature Secondary Structure PITKDLSHLLPSVIEIARSAGQLILEIYEKKDYEEFTKSDDTPVTSADLAAHKLISKKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHH SELTPDIPVLSEEAADISLEQRSQWDRYWLVDPLDGTQEFIARSGDFATIIALIEHNKPV HHHCCCCCCCCCHHHCCCHHHHCCCCCEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCE MGVVYAPVSGVSYYAYSGKGAWKIPDLNDSVKIKTHRHELPNQSITMAISRRQDINRITN EEEEECCCCCCEEEEECCCCCEECCCCCCCEEEEEHHHHCCCCCEEEEEHHHHHHHHHHH RMSSAWNYDLVPLGSAALKACLVAEGTVDCYLRIGPTGEWDTAATQCIVEEAGGRILSTQ HHHHCCCCCEEECCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEE LEPLSYNERETLENPNFIVLGDADLPWAEILQGKD CCCCCCCCHHHCCCCCEEEEECCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]