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The map label for this gene is nudE [H]

Identifier: 218708211

GI number: 218708211

Start: 140944

End: 141504

Strand: Reverse

Name: nudE [H]

Synonym: VS_0147

Alternate gene names: 218708211

Gene position: 141504-140944 (Counterclockwise)

Preceding gene: 218708212

Following gene: 218708210

Centisome position: 4.29

GC content: 46.7

Gene sequence:

>561_bases
GTGAGCGCAATGACAAAAAGGACCAAACCAGAAATATTGGCTCAGCAAACTGTCGCTCAATCAAAACTGTTCTCTATCGA
GTCTCTCGATTTACGCTTTTCAAACGGTGAAGAGCGCACTTACGAACGTATGAAGCCCAGCGGCCGAAACGCAGTCATGA
TGGTTCCGATTACTGAACAAGGCGATATTCTGTTAGTACGTGAATACGCTGCGGGTACAGAGCGCTATGAACTCGGCTTC
CCAAAAGGTCTAATTGATCCAGGCGAACAACCAAATGAAGCCGCCGTTCGTGAACTAAAAGAAGAGATTGGCTTTGGTGC
CAACAAGCTGACTCCTCTAAAAGAAGTGATCCTTGCACCCTCTTATTTCTCTAGCAAGATGACGCTGTTTATCGCAGAAG
AGCTCTACCCAGAGAAACTAGAAGGTGATGAACCAGAGCCACTAGACATTGTGCGCTGGCCACTTGCTCAAGCCGAAGAA
CTGTTAACGCATCTCGACTTCTGTGAGGCTCGCAGTATTACCGCCCTACTATTAGCCCTTCGCGTATTAAACAATAATTA
A

Upstream 100 bases:

>100_bases
TCCAATAATTCTAGGATATGAAAGCTAGGATCTAGGAACTCACCGTCATTTCCCCTATATTAGAATGACTTTATAAGAAA
GAATTCCAATGAGTTAAGGA

Downstream 100 bases:

>100_bases
AACAGTCAGAATCACTCGAAGAGTAAGAGAATATTTATGCCAATAACAAAAGATTTGTCTCACCTGCTGCCCTCTGTCAT
TGAGATTGCTCGCTCTGCTG

Product: ADP-ribose diphosphatase NudE

Products: AMP; D-Ribose 5- Phosphate. [C]

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSAMTKRTKPEILAQQTVAQSKLFSIESLDLRFSNGEERTYERMKPSGRNAVMMVPITEQGDILLVREYAAGTERYELGF
PKGLIDPGEQPNEAAVRELKEEIGFGANKLTPLKEVILAPSYFSSKMTLFIAEELYPEKLEGDEPEPLDIVRWPLAQAEE
LLTHLDFCEARSITALLLALRVLNNN

Sequences:

>Translated_186_residues
MSAMTKRTKPEILAQQTVAQSKLFSIESLDLRFSNGEERTYERMKPSGRNAVMMVPITEQGDILLVREYAAGTERYELGF
PKGLIDPGEQPNEAAVRELKEEIGFGANKLTPLKEVILAPSYFSSKMTLFIAEELYPEKLEGDEPEPLDIVRWPLAQAEE
LLTHLDFCEARSITALLLALRVLNNN
>Mature_185_residues
SAMTKRTKPEILAQQTVAQSKLFSIESLDLRFSNGEERTYERMKPSGRNAVMMVPITEQGDILLVREYAAGTERYELGFP
KGLIDPGEQPNEAAVRELKEEIGFGANKLTPLKEVILAPSYFSSKMTLFIAEELYPEKLEGDEPEPLDIVRWPLAQAEEL
LTHLDFCEARSITALLLALRVLNNN

Specific function: Active on adenosine(5')triphospho(5')adenosine (Ap3A), ADP-ribose, NADH, adenosine(5')diphospho(5')adenosine (Ap2A) [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1789800, Length=171, Percent_Identity=63.7426900584795, Blast_Score=223, Evalue=9e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 20943; Mature: 20812

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMTKRTKPEILAQQTVAQSKLFSIESLDLRFSNGEERTYERMKPSGRNAVMMVPITEQ
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCC
GDILLVREYAAGTERYELGFPKGLIDPGEQPNEAAVRELKEEIGFGANKLTPLKEVILAP
CCEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCC
SYFSSKMTLFIAEELYPEKLEGDEPEPLDIVRWPLAQAEELLTHLDFCEARSITALLLAL
CHHCCCEEEEEEHHHCHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLNNN
HHHCCC
>Mature Secondary Structure 
SAMTKRTKPEILAQQTVAQSKLFSIESLDLRFSNGEERTYERMKPSGRNAVMMVPITEQ
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCC
GDILLVREYAAGTERYELGFPKGLIDPGEQPNEAAVRELKEEIGFGANKLTPLKEVILAP
CCEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCC
SYFSSKMTLFIAEELYPEKLEGDEPEPLDIVRWPLAQAEELLTHLDFCEARSITALLLAL
CHHCCCEEEEEEHHHCHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLNNN
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP-Ribose; H2O [C]

Specific reaction: ADP-Ribose + H2O = AMP + D-Ribose 5- Phosphate. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9452430 [H]