Click here to switch to the map view.

The map label for this gene is 218708188

Identifier: 218708188

GI number: 218708188

Start: 118917

End: 119447

Strand: Reverse

Name: 218708188

Synonym: VS_0124

Alternate gene names: NA

Gene position: 119447-118917 (Counterclockwise)

Preceding gene: 218708189

Following gene: 218708186

Centisome position: 3.62

GC content: 47.83

Gene sequence:

>531_bases
ATGAAGCCAATCATTATTACTGGAGGCCCCGGAGCCGGGAAGACAACACTGATCAATGCCTTGGGTGACATGGGTTACCC
AACCTTCGCAGAGTCCTCTCGCCATCTAATTGAACAGCAGAGCCAACTTGAGAATGGTATCTTACCTTGGTTAGACCTAC
CGGGCTTTGCTCGCTTGTGCTTAGACGTGATGAGCGAGCAAAAAGAGCAAGCGAAGCAGCACCAAAGTGCTTTTCTTGAT
CGCGCCATTCCAGATATCTGTGGTTACTTGTCTCAGGCTAATCTTGAGATTGATGCGAACTACCGAGAAGCAAGCCAAGG
TTATCACCCCCAAGTACTGTTCTGTCGCCCTGAGGCTTCTATTTATGTTCAAGATGAAGTGCGCCCTTATCCGTTTGAAG
AGGCATTAGAGATTCACCACGCGCTAGTCAGAGTCTATCAAGATCTTGGGTATGAGGTTGTCGAGGTGCCATTTATGTCA
GTCGAAGAACGGGCTCTATTTGTTATAAGCCACCTAGGTATCAAAAGCTAG

Upstream 100 bases:

>100_bases
ACATCACCTACGCAATAACACAGATGAATGCTGCGATAGCTGAGTCGGATAAGTTCTTAGCACAACTCAACCAAAAATAA
CGTTTCAGAGACAGGACACG

Downstream 100 bases:

>100_bases
ACCCCCAACTCGGTCGTTCCTCCCTCTTGAGGATGACGACTGTGACTCTTTGAGTCTCTGACTTTCAACCATCAAAAGCA
ATCTTGGAAATAGATTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: ATPase; P-Loop Containing Nucleoside Triphosphate Hydrolase; ATPase-Like; Transcriptional Regulator

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKPIIITGGPGAGKTTLINALGDMGYPTFAESSRHLIEQQSQLENGILPWLDLPGFARLCLDVMSEQKEQAKQHQSAFLD
RAIPDICGYLSQANLEIDANYREASQGYHPQVLFCRPEASIYVQDEVRPYPFEEALEIHHALVRVYQDLGYEVVEVPFMS
VEERALFVISHLGIKS

Sequences:

>Translated_176_residues
MKPIIITGGPGAGKTTLINALGDMGYPTFAESSRHLIEQQSQLENGILPWLDLPGFARLCLDVMSEQKEQAKQHQSAFLD
RAIPDICGYLSQANLEIDANYREASQGYHPQVLFCRPEASIYVQDEVRPYPFEEALEIHHALVRVYQDLGYEVVEVPFMS
VEERALFVISHLGIKS
>Mature_176_residues
MKPIIITGGPGAGKTTLINALGDMGYPTFAESSRHLIEQQSQLENGILPWLDLPGFARLCLDVMSEQKEQAKQHQSAFLD
RAIPDICGYLSQANLEIDANYREASQGYHPQVLFCRPEASIYVQDEVRPYPFEEALEIHHALVRVYQDLGYEVVEVPFMS
VEERALFVISHLGIKS

Specific function: Unknown

COG id: COG3911

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19777; Mature: 19777

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIIITGGPGAGKTTLINALGDMGYPTFAESSRHLIEQQSQLENGILPWLDLPGFARLC
CCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LDVMSEQKEQAKQHQSAFLDRAIPDICGYLSQANLEIDANYREASQGYHPQVLFCRPEAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHCCCCCCEEEEECCCCC
IYVQDEVRPYPFEEALEIHHALVRVYQDLGYEVVEVPFMSVEERALFVISHLGIKS
EEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKPIIITGGPGAGKTTLINALGDMGYPTFAESSRHLIEQQSQLENGILPWLDLPGFARLC
CCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LDVMSEQKEQAKQHQSAFLDRAIPDICGYLSQANLEIDANYREASQGYHPQVLFCRPEAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHCCCCCCEEEEECCCCC
IYVQDEVRPYPFEEALEIHHALVRVYQDLGYEVVEVPFMSVEERALFVISHLGIKS
EEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA