Click here to switch to the map view.

The map label for this gene is 218708189

Identifier: 218708189

GI number: 218708189

Start: 119468

End: 120109

Strand: Reverse

Name: 218708189

Synonym: VS_0125

Alternate gene names: NA

Gene position: 120109-119468 (Counterclockwise)

Preceding gene: 218708193

Following gene: 218708188

Centisome position: 3.64

GC content: 44.55

Gene sequence:

>642_bases
ATGCCTTATTTAATAGTTATAGTCCTCTCTATTTTTACTCTTACTGGATGCCAATCAGCTTATTACTCCGCCATGGAGCA
AGTGGGTTACCACAAGCGTGACATTATGGTTGATAGAGTGGAAGACGCTAAAGAGTCGCAACAGGACGCTCAGGAAGAGT
TTACTAGCGCACTTGAAGCCTTGAGTAGCCTGACTAATTTTAGTGGCGGCGACCTTGAAGACATGTACAACAAGATTAAT
GATAAATACCAAAACAGCGAGAAAGCCGCGCAAAATGTCAGTGACCGAATTGCTGCGATTGAAGATGTGTCGGATGCGCT
ATTTGCAGAGTGGCAGGGAGAGTTGGACCTTTACACCAGCGATTCACTGCGTCGTTCAAGTGAGAAAAAGCTGCGTGAAA
CCAAATCATCTTACCAGACCATGCTTTCAGCGATGAAACGGGCTGAGAAGAAAATGGATCCGGTACTCAACACTCTTCGC
GACAACACGCTTTATCTCAAACACAACCTCAATGCGAGTGCCGTTGGTTCATTGCAGGGAGAGTTTATGAGCTTAGAAAA
AGACATCACCTACGCAATAACACAGATGAATGCTGCGATAGCTGAGTCGGATAAGTTCTTAGCACAACTCAACCAAAAAT
AA

Upstream 100 bases:

>100_bases
TCTACAATCAAAAACTCTAACGCCGTTATCGAGCATTTTAACAAGCTAGGTTGAGCAGTTATTTACTACGATTGATATTA
TTTAACTATAGGAAACTAGG

Downstream 100 bases:

>100_bases
CGTTTCAGAGACAGGACACGATGAAGCCAATCATTATTACTGGAGGCCCCGGAGCCGGGAAGACAACACTGATCAATGCC
TTGGGTGACATGGGTTACCC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; ATPase; Glutamine Synthetase

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MPYLIVIVLSIFTLTGCQSAYYSAMEQVGYHKRDIMVDRVEDAKESQQDAQEEFTSALEALSSLTNFSGGDLEDMYNKIN
DKYQNSEKAAQNVSDRIAAIEDVSDALFAEWQGELDLYTSDSLRRSSEKKLRETKSSYQTMLSAMKRAEKKMDPVLNTLR
DNTLYLKHNLNASAVGSLQGEFMSLEKDITYAITQMNAAIAESDKFLAQLNQK

Sequences:

>Translated_213_residues
MPYLIVIVLSIFTLTGCQSAYYSAMEQVGYHKRDIMVDRVEDAKESQQDAQEEFTSALEALSSLTNFSGGDLEDMYNKIN
DKYQNSEKAAQNVSDRIAAIEDVSDALFAEWQGELDLYTSDSLRRSSEKKLRETKSSYQTMLSAMKRAEKKMDPVLNTLR
DNTLYLKHNLNASAVGSLQGEFMSLEKDITYAITQMNAAIAESDKFLAQLNQK
>Mature_212_residues
PYLIVIVLSIFTLTGCQSAYYSAMEQVGYHKRDIMVDRVEDAKESQQDAQEEFTSALEALSSLTNFSGGDLEDMYNKIND
KYQNSEKAAQNVSDRIAAIEDVSDALFAEWQGELDLYTSDSLRRSSEKKLRETKSSYQTMLSAMKRAEKKMDPVLNTLRD
NTLYLKHNLNASAVGSLQGEFMSLEKDITYAITQMNAAIAESDKFLAQLNQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24034; Mature: 23903

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYLIVIVLSIFTLTGCQSAYYSAMEQVGYHKRDIMVDRVEDAKESQQDAQEEFTSALEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSSLTNFSGGDLEDMYNKINDKYQNSEKAAQNVSDRIAAIEDVSDALFAEWQGELDLYTS
HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
DSLRRSSEKKLRETKSSYQTMLSAMKRAEKKMDPVLNTLRDNTLYLKHNLNASAVGSLQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHH
EFMSLEKDITYAITQMNAAIAESDKFLAQLNQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PYLIVIVLSIFTLTGCQSAYYSAMEQVGYHKRDIMVDRVEDAKESQQDAQEEFTSALEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSSLTNFSGGDLEDMYNKINDKYQNSEKAAQNVSDRIAAIEDVSDALFAEWQGELDLYTS
HHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
DSLRRSSEKKLRETKSSYQTMLSAMKRAEKKMDPVLNTLRDNTLYLKHNLNASAVGSLQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHH
EFMSLEKDITYAITQMNAAIAESDKFLAQLNQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA