| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708186
Identifier: 218708186
GI number: 218708186
Start: 116093
End: 116248
Strand: Reverse
Name: 218708186
Synonym: VS_0122
Alternate gene names: NA
Gene position: 116248-116093 (Counterclockwise)
Preceding gene: 218708188
Following gene: 218708185
Centisome position: 3.52
GC content: 36.54
Gene sequence:
>156_bases TTGGCTATAGATAAATCAGCATCGATTAATGCACGTATAGACATTAATCAATGCTGGTTTCAACCGAATCGAGCTAATAC CGAATTAATAACACTGGAGGTTATCCAAGATGTCAGTAGAAAATGTACTATCCCTGATCCAAGAGAACGAAGTTAA
Upstream 100 bases:
>100_bases CCGTGCAATCAAAGATCATTTTGGTGCAAAAGTCAGAGTTCGCAAATCAAGTAAACAAGTAAATCATTGAAATTAATGGA ATAATTTTTTTGGCACGTTT
Downstream 100 bases:
>100_bases ATTTATCGACTTACGTTTTACTGATACAAAAGGTAAAGAGCAGCACATCTCTATTCCTTCTCACCAAGTTGATGCAGACT TCTTCGAAGAAGGCAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MAIDKSASINARIDINQCWFQPNRANTELITLEVIQDVSRKCTIPDPRERS
Sequences:
>Translated_51_residues MAIDKSASINARIDINQCWFQPNRANTELITLEVIQDVSRKCTIPDPRERS >Mature_50_residues AIDKSASINARIDINQCWFQPNRANTELITLEVIQDVSRKCTIPDPRERS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5859; Mature: 5728
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDKSASINARIDINQCWFQPNRANTELITLEVIQDVSRKCTIPDPRERS CCCCCCCCCEEEEECHHEEECCCCCCCEEEEHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AIDKSASINARIDINQCWFQPNRANTELITLEVIQDVSRKCTIPDPRERS CCCCCCCCEEEEECHHEEECCCCCCCEEEEHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA