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The map label for this gene is hemG [H]

Identifier: 218708131

GI number: 218708131

Start: 43216

End: 43743

Strand: Direct

Name: hemG [H]

Synonym: VS_0044

Alternate gene names: 218708131

Gene position: 43216-43743 (Clockwise)

Preceding gene: 218708130

Following gene: 218708133

Centisome position: 1.31

GC content: 39.58

Gene sequence:

>528_bases
GTGGCAAAAGCTCTATTTTTGTATTCAAGCCGTGAAGGGCAGACCAAGAAAATCTTGAACTATATAAAAGAAGAAATGAA
TGAGTTCGAATGTGAGCTTCAAGATCTGCACACTATTACTAGTGTCGATTTTGCTCAATACGACAGAGTATTGATTGGCG
CATCTATTCGCTATGGCCACCTTAATAAGAAGCTATATCAGTTCATTGATGCCAACCTTACTCAGTTACAATTAAACAAG
GTCGCTTTCTTCTGCGTTAACTTAACGGCTCGTAAAGAAGACCAAGGTAAAGATACCCCTGAAGGTAGCGCTTATATTAA
GAAGTTTCTTCTTAAGTCACCGTGGCAGCCAACTTTGATCGGTGTATTCGCGGGTGCTCTCTATTACCCACGTTATAACT
GGTTCGATAGAACTATGATTCGCTTCATTATGAATATGACAGGCGGAGAAACGGATACAACCAAGGAAGTTGAATACACA
AACTGGGAAAAAGTCTCTTTATTCTCTAAGAAACTGCAAGAGATGTAA

Upstream 100 bases:

>100_bases
AAGTGGGTGTTGATCGTATCTATGCTGTTTGGTCGTTTAGAGATATTCACCTTATTAATTTTATTGACCCCTACGTTTTG
GCGTAGCTAAGGACAACATT

Downstream 100 bases:

>100_bases
GAGAAAAGCCTACTTTTGAGGCGTTTTGAGTTCTTTTTAATCGAACGAATAAAAAAACGAGAAAAACTTCAAAAAGGGCT
TGCCAGTGTGATCGAAATCT

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAKALFLYSSREGQTKKILNYIKEEMNEFECELQDLHTITSVDFAQYDRVLIGASIRYGHLNKKLYQFIDANLTQLQLNK
VAFFCVNLTARKEDQGKDTPEGSAYIKKFLLKSPWQPTLIGVFAGALYYPRYNWFDRTMIRFIMNMTGGETDTTKEVEYT
NWEKVSLFSKKLQEM

Sequences:

>Translated_175_residues
MAKALFLYSSREGQTKKILNYIKEEMNEFECELQDLHTITSVDFAQYDRVLIGASIRYGHLNKKLYQFIDANLTQLQLNK
VAFFCVNLTARKEDQGKDTPEGSAYIKKFLLKSPWQPTLIGVFAGALYYPRYNWFDRTMIRFIMNMTGGETDTTKEVEYT
NWEKVSLFSKKLQEM
>Mature_174_residues
AKALFLYSSREGQTKKILNYIKEEMNEFECELQDLHTITSVDFAQYDRVLIGASIRYGHLNKKLYQFIDANLTQLQLNKV
AFFCVNLTARKEDQGKDTPEGSAYIKKFLLKSPWQPTLIGVFAGALYYPRYNWFDRTMIRFIMNMTGGETDTTKEVEYTN
WEKVSLFSKKLQEM

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790285, Length=175, Percent_Identity=45.7142857142857, Blast_Score=174, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: NA

EC number: =1.3.5.3 [H]

Molecular weight: Translated: 20505; Mature: 20374

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKALFLYSSREGQTKKILNYIKEEMNEFECELQDLHTITSVDFAQYDRVLIGASIRYGH
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCEEECH
LNKKLYQFIDANLTQLQLNKVAFFCVNLTARKEDQGKDTPEGSAYIKKFLLKSPWQPTLI
HHHHHHHHHCCCHHHHHHHHHEEEEEECHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHH
GVFAGALYYPRYNWFDRTMIRFIMNMTGGETDTTKEVEYTNWEKVSLFSKKLQEM
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AKALFLYSSREGQTKKILNYIKEEMNEFECELQDLHTITSVDFAQYDRVLIGASIRYGH
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCEEECH
LNKKLYQFIDANLTQLQLNKVAFFCVNLTARKEDQGKDTPEGSAYIKKFLLKSPWQPTLI
HHHHHHHHHCCCHHHHHHHHHEEEEEECHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHH
GVFAGALYYPRYNWFDRTMIRFIMNMTGGETDTTKEVEYTNWEKVSLFSKKLQEM
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]