| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ilvC [H]
Identifier: 218708133
GI number: 218708133
Start: 51041
End: 52525
Strand: Direct
Name: ilvC [H]
Synonym: VS_0061
Alternate gene names: 218708133
Gene position: 51041-52525 (Clockwise)
Preceding gene: 218708131
Following gene: 218708138
Centisome position: 1.55
GC content: 46.13
Gene sequence:
>1485_bases ATGGCTAACTATTTCAATACATTAAACCTTCGTGAGCAACTAGACCAATTAGGTCGCTGCCGTTTCATGGATCGTGAAGA ATTTACGACTGAAGCTGAATACCTTGAAGGTAAGAAGATCGTCATTGTTGGCTGTGGTGCTCAAGGCCTGAACCAAGGTC TAAACATGCGTGATTCTGGTCTAGACGTATCTTACGCTCTACGCCAAGCTGCAATTGATGAGAAGCGTCAATCATTCAAG AATGCCGACGAAAACGGCTTTGTAGTTGGTAGCTACGAAACGCTAATCCCTCAAGCAGACCTAGTTATTAACCTTACTCC CGACAAGCAACACACTAATGTTGTTGAGACAGTAATGCCTCTAATGAAAGAAGGCGCTGCTCTTGGTTACTCTCACGGCT TTAACGTTGTGGAAGAAGGCATGCAATTACGAGCTGACCTTACTGTAGTAATGGTTGCACCTAAGTGTCCAGGTTCTGAA GTTCGCGAAGAGTACAAGCGTGGCTTCGGTGTACCAACACTTATCGCTGTTCACCCAGAAAACGACCCTAAAGGTGAAGG TTGGGATATCGCTAAAGCTTGGGCTGCAGGTACTGGTGGTCACCGTGCTGGTTGCCTAGAGTCTTCTTTCGTAGCAGAAG TTAAATCTGACCTGATGGGTGAGCAAACAATCCTTTGTGGCATGCTACAAGCGGGTTCTATCGTATCTTACGAGAAGATG ATTGCTGATGGTATCGAACCTGGCTACGCAGGCAAGCTTCTACAATACGGTTGGGAAACGATCACTGAAGCACTTAAGTT TGGTGGCGTAACTCACATGATGGATCGCTTATCTAACCCAGCTAAAGTTAAAGCGTTTGAGCTTTCTGAAGAGCTTAAAG ACCTAATGCGTCCGCTTTACAACAAGCACATGGATGACATCATCTCTGGTCACTTCTCTAGCACAATGATGGCTGACTGG GCGAACGATGACGTGAACCTACTAGGCTGGCGTGAAGAGACAGGCGAAACTGCATTCGAAAACTACCCAGCTTCTGACGT AGAAATCTCAGAGCAAGAGTACTTCGACAACGGTATCCTAATGGTTGCTATGGTTCGTGCCGGTGTTGAGCTAGCATTCG AAGCTATGACGGCATCAGGCATCATTGATGAGTCTGCTTACTACGAATCTCTACATGAGCTTCCACTAATTGCAAACACA GTTGCTCGTAAGCGTCTTTACGAAATGAACGTTGTAATCTCTGATACTGCTGAGTACGGTAACTACCTATTCGCTAACGT AGCAACACCGCTACTACGTGAGAAGTTCATGCCTTCAGTAGCGACAGACGTAATCGGCCGTGGTCTAGGTGGAACATCTA ACCAAGTTGATAACGCTAAGCTAATTGAAGTAAACGAAGCTATCCGTAACCACCCTGTAGAGTACATTGGTGAAGAGCTA CGTAGCTACATGAGCGACATGAAGCGTATCGCTGTAGGCGGTTAA
Upstream 100 bases:
>100_bases GAATATATCACTTTCAGCAACGGAGTGTCTGTTTTAGTATGAAGTCATTCGATAGAGAGATATCGACCTTACGGACTTAT TTTTAAAGGAGTGCCCTACA
Downstream 100 bases:
>100_bases TGAGTCTCTTAGATACTGACAAATTTGCAAAACAAGCGAAGCAGTATCATTAGCTCCTTACTGGTTGGAGTTATAAATAA GCAACACAACATCTAATAGA
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MANYFNTLNLREQLDQLGRCRFMDREEFTTEAEYLEGKKIVIVGCGAQGLNQGLNMRDSGLDVSYALRQAAIDEKRQSFK NADENGFVVGSYETLIPQADLVINLTPDKQHTNVVETVMPLMKEGAALGYSHGFNVVEEGMQLRADLTVVMVAPKCPGSE VREEYKRGFGVPTLIAVHPENDPKGEGWDIAKAWAAGTGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVSYEKM IADGIEPGYAGKLLQYGWETITEALKFGGVTHMMDRLSNPAKVKAFELSEELKDLMRPLYNKHMDDIISGHFSSTMMADW ANDDVNLLGWREETGETAFENYPASDVEISEQEYFDNGILMVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANT VARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPSVATDVIGRGLGGTSNQVDNAKLIEVNEAIRNHPVEYIGEEL RSYMSDMKRIAVGG
Sequences:
>Translated_494_residues MANYFNTLNLREQLDQLGRCRFMDREEFTTEAEYLEGKKIVIVGCGAQGLNQGLNMRDSGLDVSYALRQAAIDEKRQSFK NADENGFVVGSYETLIPQADLVINLTPDKQHTNVVETVMPLMKEGAALGYSHGFNVVEEGMQLRADLTVVMVAPKCPGSE VREEYKRGFGVPTLIAVHPENDPKGEGWDIAKAWAAGTGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVSYEKM IADGIEPGYAGKLLQYGWETITEALKFGGVTHMMDRLSNPAKVKAFELSEELKDLMRPLYNKHMDDIISGHFSSTMMADW ANDDVNLLGWREETGETAFENYPASDVEISEQEYFDNGILMVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANT VARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPSVATDVIGRGLGGTSNQVDNAKLIEVNEAIRNHPVEYIGEEL RSYMSDMKRIAVGG >Mature_493_residues ANYFNTLNLREQLDQLGRCRFMDREEFTTEAEYLEGKKIVIVGCGAQGLNQGLNMRDSGLDVSYALRQAAIDEKRQSFKN ADENGFVVGSYETLIPQADLVINLTPDKQHTNVVETVMPLMKEGAALGYSHGFNVVEEGMQLRADLTVVMVAPKCPGSEV REEYKRGFGVPTLIAVHPENDPKGEGWDIAKAWAAGTGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVSYEKMI ADGIEPGYAGKLLQYGWETITEALKFGGVTHMMDRLSNPAKVKAFELSEELKDLMRPLYNKHMDDIISGHFSSTMMADWA NDDVNLLGWREETGETAFENYPASDVEISEQEYFDNGILMVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANTV ARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPSVATDVIGRGLGGTSNQVDNAKLIEVNEAIRNHPVEYIGEELR SYMSDMKRIAVGG
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=494, Percent_Identity=73.8866396761134, Blast_Score=751, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323387, Length=276, Percent_Identity=29.3478260869565, Blast_Score=98, Evalue=2e-21,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - InterPro: IPR014359 - InterPro: IPR016040 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 54581; Mature: 54449
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYFNTLNLREQLDQLGRCRFMDREEFTTEAEYLEGKKIVIVGCGAQGLNQGLNMRDSG CCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCC LDVSYALRQAAIDEKRQSFKNADENGFVVGSYETLIPQADLVINLTPDKQHTNVVETVMP CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCCCEEEEECCCCHHHHHHHHHHH LMKEGAALGYSHGFNVVEEGMQLRADLTVVMVAPKCPGSEVREEYKRGFGVPTLIAVHPE HHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCC NDPKGEGWDIAKAWAAGTGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVSYEKM CCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH IADGIEPGYAGKLLQYGWETITEALKFGGVTHMMDRLSNPAKVKAFELSEELKDLMRPLY HHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH NKHMDDIISGHFSSTMMADWANDDVNLLGWREETGETAFENYPASDVEISEQEYFDNGIL HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCHHHHCCCCCCCCCCHHHHHCCCHH MVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANTVARKRLYEMNVVISDTAEYG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCHHHC NYLFANVATPLLREKFMPSVATDVIGRGLGGTSNQVDNAKLIEVNEAIRNHPVEYIGEEL CEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHCCHHHHHHHH RSYMSDMKRIAVGG HHHHHHHHHHHCCC >Mature Secondary Structure ANYFNTLNLREQLDQLGRCRFMDREEFTTEAEYLEGKKIVIVGCGAQGLNQGLNMRDSG CCCHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCC LDVSYALRQAAIDEKRQSFKNADENGFVVGSYETLIPQADLVINLTPDKQHTNVVETVMP CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCCCEEEEECCCCHHHHHHHHHHH LMKEGAALGYSHGFNVVEEGMQLRADLTVVMVAPKCPGSEVREEYKRGFGVPTLIAVHPE HHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCC NDPKGEGWDIAKAWAAGTGGHRAGCLESSFVAEVKSDLMGEQTILCGMLQAGSIVSYEKM CCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH IADGIEPGYAGKLLQYGWETITEALKFGGVTHMMDRLSNPAKVKAFELSEELKDLMRPLY HHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH NKHMDDIISGHFSSTMMADWANDDVNLLGWREETGETAFENYPASDVEISEQEYFDNGIL HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCHHHHCCCCCCCCCCHHHHHCCCHH MVAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANTVARKRLYEMNVVISDTAEYG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCHHHC NYLFANVATPLLREKFMPSVATDVIGRGLGGTSNQVDNAKLIEVNEAIRNHPVEYIGEEL CEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHCCHHHHHHHH RSYMSDMKRIAVGG HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA