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The map label for this gene is yddK [H]

Identifier: 218704943

GI number: 218704943

Start: 1741317

End: 1742582

Strand: Reverse

Name: yddK [H]

Synonym: ECUMN_1724

Alternate gene names: 218704943

Gene position: 1742582-1741317 (Counterclockwise)

Preceding gene: 218704944

Following gene: 218704942

Centisome position: 33.5

GC content: 35.07

Gene sequence:

>1266_bases
GTGATTATGACCAATATTAATACAGCTTGTGTAAAAAATAATGCCAGTTATCAATTAAATAACGCATTACCTAACAAAGA
AACCATCTCCAGCAATTTTTGTGAACGACTGGCACAATGGGGTAATAAGTCGCTTAATAATGGTGAAGAAAGAGCTATTG
CCGTAGAGCGAATTAAAGAAGCTTACAATTCGAACATGGCATCTCTTGATTTGTCATATCTTGATTTGAGTGAGTTACCG
CCTATCCCCTCGACAGTTAACACGTTAAATCTGGAAAAAAATTGTCTCACTTGTCTTGACTTTACTGACAATGCCAGCCT
CGTCAATATCAACCTCAGCTTTAATAAAATTAAAACGATAACCTTTCCAAATGAATCAAAACTGGAAAATATTTATATTG
ATCACAACAATCTGGAAAATTTGGATTTAAAAAATCAGTATTCATTGGTTAACCTGGAAGCGCAAAATAACAACCTGACA
AAAATTAATATTTCTGATAGTTATAAACTGAAATTTCTTAATCTTGATTATAACAAGCTAGCATCGCTGGATCTCTCCCG
GCAAGAATCTCTGATTGAGTTAAGTGCCCATCACAATATGATCACTGACCTTATATTACACAATCATCCCAGGATGAAAA
AAATCACTTTAAACGACAACCATATTGCACACTTAAACGCGAAAACCACTACAAAACTGGAATATTTAAACTTAAGCAAT
AACAATTTATTGCCAACAGATGACATTGATCAATTAATATCATCAAAACATCTTTGGCATGTATTAGTTAACGGCATCAA
CAATGATCCACTTGCCCAAATGCAGTACTGGACTGCAGTAAGAAATATAATTGATGACACTAATGAAGTGACCATTGAAT
TATCTTATAACCTGGCAATCACAAATATCGATACCAGCGATGAACATCTTGTAGAAGTAAGCGAGAATTCCGAAGGAAAT
CATATAAAAGACAATGACTCAATGTCTATTCGTTATAGATCAAAATATTATTCCAGAGAGTACGCTTTAATAGAAGAAGA
AACAATATTTTCTGACGCAGAACTAAAAGCCATTCTGCCTATGCATCGCATGTACGGGGTTGGTGACTATAAGTCAAATT
CCTCTTCTCTACCCTCACACTCGGGGCTAAAGGACCCAACGGGCACACCCGTCTGTTATTATATTCATAATGAGGATAAA
CCTTCCTTAGGTTATGGTTCAACACCCAATAATTGGTTAAGCCAATTCTTTTCTACAGAGTTATAA

Upstream 100 bases:

>100_bases
TTAAGTAAAAATGAGCAATTTTTGATATTTCTGGTCATTCACCTCAATTAATATTATTCCATACCCTCCGGGGACATCTT
ACTATAATATTTATTGATGA

Downstream 100 bases:

>100_bases
AACACATCCTGATTTATCAAGGGTGATAAATCAGAAAAGAAAGTATTACTACGGAGCAGTTATGAAATTCCCTTCAATAT
TTAATAAAATAAATCCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKEAYNSNMASLDLSYLDLSELP
PIPSTVNTLNLEKNCLTCLDFTDNASLVNINLSFNKIKTITFPNESKLENIYIDHNNLENLDLKNQYSLVNLEAQNNNLT
KINISDSYKLKFLNLDYNKLASLDLSRQESLIELSAHHNMITDLILHNHPRMKKITLNDNHIAHLNAKTTTKLEYLNLSN
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIELSYNLAITNIDTSDEHLVEVSENSEGN
HIKDNDSMSIRYRSKYYSREYALIEEETIFSDAELKAILPMHRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDK
PSLGYGSTPNNWLSQFFSTEL

Sequences:

>Translated_421_residues
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKEAYNSNMASLDLSYLDLSELP
PIPSTVNTLNLEKNCLTCLDFTDNASLVNINLSFNKIKTITFPNESKLENIYIDHNNLENLDLKNQYSLVNLEAQNNNLT
KINISDSYKLKFLNLDYNKLASLDLSRQESLIELSAHHNMITDLILHNHPRMKKITLNDNHIAHLNAKTTTKLEYLNLSN
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIELSYNLAITNIDTSDEHLVEVSENSEGN
HIKDNDSMSIRYRSKYYSREYALIEEETIFSDAELKAILPMHRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDK
PSLGYGSTPNNWLSQFFSTEL
>Mature_421_residues
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKEAYNSNMASLDLSYLDLSELP
PIPSTVNTLNLEKNCLTCLDFTDNASLVNINLSFNKIKTITFPNESKLENIYIDHNNLENLDLKNQYSLVNLEAQNNNLT
KINISDSYKLKFLNLDYNKLASLDLSRQESLIELSAHHNMITDLILHNHPRMKKITLNDNHIAHLNAKTTTKLEYLNLSN
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIELSYNLAITNIDTSDEHLVEVSENSEGN
HIKDNDSMSIRYRSKYYSREYALIEEETIFSDAELKAILPMHRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDK
PSLGYGSTPNNWLSQFFSTEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 9 LRR (leucine-rich) repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001611 [H]

Pfam domain/function: PF00560 LRR_1 [H]

EC number: NA

Molecular weight: Translated: 47902; Mature: 47902

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKE
CEEECCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AYNSNMASLDLSYLDLSELPPIPSTVNTLNLEKNCLTCLDFTDNASLVNINLSFNKIKTI
HHCCCCEEEEEEEECHHHCCCCCCCCEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEEE
TFPNESKLENIYIDHNNLENLDLKNQYSLVNLEAQNNNLTKINISDSYKLKFLNLDYNKL
ECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEEECCHHHH
ASLDLSRQESLIELSAHHNMITDLILHNHPRMKKITLNDNHIAHLNAKTTTKLEYLNLSN
HCCCCCHHHHHEEHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCEEEEEEEECCC
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIELSYNLAI
CCCCCCCHHHHHHCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEE
TNIDTSDEHLVEVSENSEGNHIKDNDSMSIRYRSKYYSREYALIEEETIFSDAELKAILP
EECCCCCCEEEEEECCCCCCEECCCCCEEEEEECHHCCCCEEEEEHHHCCCCCCHHHHHH
MHRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDKPSLGYGSTPNNWLSQFFSTE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCC
L
C
>Mature Secondary Structure
MIMTNINTACVKNNASYQLNNALPNKETISSNFCERLAQWGNKSLNNGEERAIAVERIKE
CEEECCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AYNSNMASLDLSYLDLSELPPIPSTVNTLNLEKNCLTCLDFTDNASLVNINLSFNKIKTI
HHCCCCEEEEEEEECHHHCCCCCCCCEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEEE
TFPNESKLENIYIDHNNLENLDLKNQYSLVNLEAQNNNLTKINISDSYKLKFLNLDYNKL
ECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEEECCHHHH
ASLDLSRQESLIELSAHHNMITDLILHNHPRMKKITLNDNHIAHLNAKTTTKLEYLNLSN
HCCCCCHHHHHEEHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCEEEEEEEECCC
NNLLPTDDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIELSYNLAI
CCCCCCCHHHHHHCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEE
TNIDTSDEHLVEVSENSEGNHIKDNDSMSIRYRSKYYSREYALIEEETIFSDAELKAILP
EECCCCCCEEEEEECCCCCCEECCCCCEEEEEECHHCCCCEEEEEHHHCCCCCCHHHHHH
MHRMYGVGDYKSNSSSLPSHSGLKDPTGTPVCYYIHNEDKPSLGYGSTPNNWLSQFFSTE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]