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The map label for this gene is yddK [H]

Identifier: 218704942

GI number: 218704942

Start: 1739999

End: 1741294

Strand: Reverse

Name: yddK [H]

Synonym: ECUMN_1723

Alternate gene names: 218704942

Gene position: 1741294-1739999 (Counterclockwise)

Preceding gene: 218704943

Following gene: 218704941

Centisome position: 33.47

GC content: 33.33

Gene sequence:

>1296_bases
GTGATAAATCAGAAAAGAAAGTATTACTACGGAGCAGTTATGAAATTCCCTTCAATATTTAATAAAATAAATCCACAATC
CATACAGCAACATCCAGAAAAAAATGAACTTAACTGGATGCTCGAATTAAATCAATGGAAAGCAGAACGCATACTTACAG
GTGAAATCCATCGTCCGGAATGCCGAAACGAAGCCGCTAAAAGGATAAATTGTGCTTTTTTGTCGAAACAGAATAATATT
GATTTATCAGGGCTTAATTTAACTACTCAACCACCAGGACTGCAAAACTTCACCTCTATCAATCTTGATGAGAACCAACT
CAAACATTTTGATGCAACCACCTACGATAGACTCATCAACCTTAGTCTGAATAGTAATGCTCTTGAGTCAATAAATTTTC
CTCAAGGTAGAAATGTAAGCATTACACATATATCTATGAATAATAATTCTCTCAGAAATATTGATATAGATAGGCTTTCA
TCAATTACTTATTTTAGTGCGGCACATAATCAACTAGAGTTTGTGCAATTAGAATGTTGCGAAAGGCTGCAGTACCTGAA
TCTCAGCCACAATCAATTAACTGATATTGTTGCAGGAAATAAAGATGAACTCTTACTTCTGGATCTATCCCATAATAAAC
TAACAAGTTTACATAATACCTTATTTCCCAACTTGAATACGTTACTTATCAACAACAACTTGCTTTCTGAAATTAAAATA
TTCTTTAGCAACTTCTGCAATATTCAGACATTAAACGCTGCGAACAATCAGTTGGAAAAAATAAACCTTCATTTCCTGAC
TTATCTTTCATCTATCAAAAGTTTAAGGCTGGACAATAATAAAATAACCCGCATTGACACTAAGAATACGTCCGATATTG
GAACTTTATTCCCCATAATAAAACAGAGCAAAAACTTAAATTTTTTAAATGTTTCTGGGAAGAACAATTGCCCTACTATG
CAGCTCATGTTATTTAATTTATTTTCCCCAGCACTTAAGCTTAATACTGGCCTGGCAATTCTTTCGCCTGGTGCATTTGA
AATTCACTCTGAAGGAGTAGATGTGGATAACGAATTGTTTCACTATACTATTAAAGAAGCATATACCCCATATAATATAC
ACACTTATAAAACAGAAGAAGTTGTAAATCAGATGAATATAAAAATTAAAAATATGACATTAGATGAAATAAACAATACT
TACTGTAATAACGATTATTACAATGAGGCGATAAGAGAGGAACCGATAGACTTTCTGGACAGATCGTTTTCCTCCAGCTC
ATGGCCTTTTCAGTGA

Upstream 100 bases:

>100_bases
AATGAGGATAAACCTTCCTTAGGTTATGGTTCAACACCCAATAATTGGTTAAGCCAATTCTTTTCTACAGAGTTATAAAA
CACATCCTGATTTATCAAGG

Downstream 100 bases:

>100_bases
ATAAATCATCACTAATTCTATAAGTGTCTGGTCTTGTTGAAAATATAAACCCTTTGGATTCATCATCTGAAGGGTTGGAT
CATGACATGCATACATAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MINQKRKYYYGAVMKFPSIFNKINPQSIQQHPEKNELNWMLELNQWKAERILTGEIHRPECRNEAAKRINCAFLSKQNNI
DLSGLNLTTQPPGLQNFTSINLDENQLKHFDATTYDRLINLSLNSNALESINFPQGRNVSITHISMNNNSLRNIDIDRLS
SITYFSAAHNQLEFVQLECCERLQYLNLSHNQLTDIVAGNKDELLLLDLSHNKLTSLHNTLFPNLNTLLINNNLLSEIKI
FFSNFCNIQTLNAANNQLEKINLHFLTYLSSIKSLRLDNNKITRIDTKNTSDIGTLFPIIKQSKNLNFLNVSGKNNCPTM
QLMLFNLFSPALKLNTGLAILSPGAFEIHSEGVDVDNELFHYTIKEAYTPYNIHTYKTEEVVNQMNIKIKNMTLDEINNT
YCNNDYYNEAIREEPIDFLDRSFSSSSWPFQ

Sequences:

>Translated_431_residues
MINQKRKYYYGAVMKFPSIFNKINPQSIQQHPEKNELNWMLELNQWKAERILTGEIHRPECRNEAAKRINCAFLSKQNNI
DLSGLNLTTQPPGLQNFTSINLDENQLKHFDATTYDRLINLSLNSNALESINFPQGRNVSITHISMNNNSLRNIDIDRLS
SITYFSAAHNQLEFVQLECCERLQYLNLSHNQLTDIVAGNKDELLLLDLSHNKLTSLHNTLFPNLNTLLINNNLLSEIKI
FFSNFCNIQTLNAANNQLEKINLHFLTYLSSIKSLRLDNNKITRIDTKNTSDIGTLFPIIKQSKNLNFLNVSGKNNCPTM
QLMLFNLFSPALKLNTGLAILSPGAFEIHSEGVDVDNELFHYTIKEAYTPYNIHTYKTEEVVNQMNIKIKNMTLDEINNT
YCNNDYYNEAIREEPIDFLDRSFSSSSWPFQ
>Mature_431_residues
MINQKRKYYYGAVMKFPSIFNKINPQSIQQHPEKNELNWMLELNQWKAERILTGEIHRPECRNEAAKRINCAFLSKQNNI
DLSGLNLTTQPPGLQNFTSINLDENQLKHFDATTYDRLINLSLNSNALESINFPQGRNVSITHISMNNNSLRNIDIDRLS
SITYFSAAHNQLEFVQLECCERLQYLNLSHNQLTDIVAGNKDELLLLDLSHNKLTSLHNTLFPNLNTLLINNNLLSEIKI
FFSNFCNIQTLNAANNQLEKINLHFLTYLSSIKSLRLDNNKITRIDTKNTSDIGTLFPIIKQSKNLNFLNVSGKNNCPTM
QLMLFNLFSPALKLNTGLAILSPGAFEIHSEGVDVDNELFHYTIKEAYTPYNIHTYKTEEVVNQMNIKIKNMTLDEINNT
YCNNDYYNEAIREEPIDFLDRSFSSSSWPFQ

Specific function: Unknown

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 9 LRR (leucine-rich) repeats [H]

Homologues:

Organism=Escherichia coli, GI1787744, Length=111, Percent_Identity=92.7927927927928, Blast_Score=224, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001611 [H]

Pfam domain/function: PF00560 LRR_1 [H]

EC number: NA

Molecular weight: Translated: 49699; Mature: 49699

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQKRKYYYGAVMKFPSIFNKINPQSIQQHPEKNELNWMLELNQWKAERILTGEIHRPE
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCH
CRNEAAKRINCAFLSKQNNIDLSGLNLTTQPPGLQNFTSINLDENQLKHFDATTYDRLIN
HHHHHHHHEEEEEEECCCCCEEECCEECCCCCCCCCCEEECCCHHHHHHCCCCCHHHEEE
LSLNSNALESINFPQGRNVSITHISMNNNSLRNIDIDRLSSITYFSAAHNQLEFVQLECC
EEECCCCHHCCCCCCCCCEEEEEEEECCCCCEECCHHHHCCEEEEHHCCCCHHHHHHHHH
ERLQYLNLSHNQLTDIVAGNKDELLLLDLSHNKLTSLHNTLFPNLNTLLINNNLLSEIKI
HHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCHHHHHHH
FFSNFCNIQTLNAANNQLEKINLHFLTYLSSIKSLRLDNNKITRIDTKNTSDIGTLFPII
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHH
KQSKNLNFLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFEIHSEGVDVDNELF
HCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHEECCCEEEECCCCEEEECCCCCCCCHHH
HYTIKEAYTPYNIHTYKTEEVVNQMNIKIKNMTLDEINNTYCNNDYYNEAIREEPIDFLD
EEEHHHCCCCCEEEEEEHHHHHHHHCEEEEEEEHHHCCCCCCCCCHHHHHHHHCCHHHHH
RSFSSSSWPFQ
HCCCCCCCCCC
>Mature Secondary Structure
MINQKRKYYYGAVMKFPSIFNKINPQSIQQHPEKNELNWMLELNQWKAERILTGEIHRPE
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCH
CRNEAAKRINCAFLSKQNNIDLSGLNLTTQPPGLQNFTSINLDENQLKHFDATTYDRLIN
HHHHHHHHEEEEEEECCCCCEEECCEECCCCCCCCCCEEECCCHHHHHHCCCCCHHHEEE
LSLNSNALESINFPQGRNVSITHISMNNNSLRNIDIDRLSSITYFSAAHNQLEFVQLECC
EEECCCCHHCCCCCCCCCEEEEEEEECCCCCEECCHHHHCCEEEEHHCCCCHHHHHHHHH
ERLQYLNLSHNQLTDIVAGNKDELLLLDLSHNKLTSLHNTLFPNLNTLLINNNLLSEIKI
HHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCHHHHHHH
FFSNFCNIQTLNAANNQLEKINLHFLTYLSSIKSLRLDNNKITRIDTKNTSDIGTLFPII
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHH
KQSKNLNFLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFEIHSEGVDVDNELF
HCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHEECCCEEEECCCCEEEECCCCCCCCHHH
HYTIKEAYTPYNIHTYKTEEVVNQMNIKIKNMTLDEINNTYCNNDYYNEAIREEPIDFLD
EEEHHHCCCCCEEEEEEHHHHHHHHCEEEEEEEHHHCCCCCCCCCHHHHHHHHCCHHHHH
RSFSSSSWPFQ
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]