| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is eprH
Identifier: 218696455
GI number: 218696455
Start: 3215047
End: 3216237
Strand: Reverse
Name: eprH
Synonym: EC55989_3140
Alternate gene names: 218696455
Gene position: 3216237-3215047 (Counterclockwise)
Preceding gene: 218696458
Following gene: 218696454
Centisome position: 62.39
GC content: 32.58
Gene sequence:
>1191_bases GTGGTATTCATGGAAAATAATGATAAATTCTTATCACAAGAATTATTGGAATCTTATGCCATTCGTTTGTTGAGCGGACC ATTGAATGGATGCGAGTATGAAATACTTAATGGGCGTCTACTTGTTATCATTGGTAATGATGTTTCGTTAGGAAGAAGTG ATGCTTTTTCTGAGTTACCAGAAAACACAATAGTCGTTCCTTATGGCGAGCTTACAGGTAGTTTTGAGATAATAATTACT ACCGACCCTGATCTGGTAGTAACATTCAGAGAATTAACAGCACAAGAACCTGAAGATAGAACGTTAACATTGAATCAGCA AATAGAAGTTTTAGGTCTCAAATTTGCTGTAAAAGAAAAAAATGAAGTTTGGCAGTATTCATTGCCAGGCATTATTGAAA ATAACATTATTTCTACAAAACAACATTTCTTTAGCAGTAAGCTGTTTAAGTATGTAATGCTTTTTTTTCTTTTTGCTATC ATTTTCATTGCTTTTTATATTGTTAATGCCAGTAATGATCCGCAGCTGAGACATATCGATAAAATTCTTGTAAACAAAAA CAGGAATTATGAAATTTTATATGGTAGAGATCATGTTATCTATATTAATACCAATATTTTGGATGAAGCAGTCTGGGTCA AACAAGCACTGGAAAAAAATCAACCAGGAAAGCCAGTACGGGTGATAAATCCTGATGATGAATCGATACGAATTTTTTCA TGGCTTGCTGATAATTTCCCTGATTTACAATATTTTAAACTTCAACTATTAGATGCCAGTAATCTAAGATTGACAGTGAG TAAGCAACGGAACGCTATCACACAGCAACTAATCGATAATCTTATTAAAGGATTACTGCAAACTATGCCATATGCCAGCA ATATAAGTATTGCGGTATTAGATGATAATGTATTGGAAAGTCAGGCTATTGAAACGTTGTCAGCGATAGGTCTTTCTTAT GAAAAATATAAAACAGCTAACAATGTGTATTTCAATATCATTGGTACGTTAAGTGACAGTGAATTAAATAAAATTAATAA CTATGTTGACGAATATTATAAACAATGGGGTAAACAATATGTAAGATTTAATGTGAATTTGAAAAATCAGGACACAAATA ATAGTTCATTTAGCTACGGAGATAACCGATTCGAGAAGTCTCAAGGTAGCAACTGGACATTTCAGGAATAA
Upstream 100 bases:
>100_bases TTCTCGAAATTATAATTTTTTTATTCTGTGTCATCATAATTTGGTCATGATATTTCCGTCTTGTTACACTACTCTAAACT AGAGCTTATGGAATTAGCGG
Downstream 100 bases:
>100_bases TTGAGGAGGACTTATGGCAGATTGGAATGGTTATATTATGGATATCAGCAATCAATTTGATCAGGGCGTTGATGATCTGA ACCAGCAAGTTGAAAAAGCG
Product: Putative Type III secretion EprH protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MVFMENNDKFLSQELLESYAIRLLSGPLNGCEYEILNGRLLVIIGNDVSLGRSDAFSELPENTIVVPYGELTGSFEIIIT TDPDLVVTFRELTAQEPEDRTLTLNQQIEVLGLKFAVKEKNEVWQYSLPGIIENNIISTKQHFFSSKLFKYVMLFFLFAI IFIAFYIVNASNDPQLRHIDKILVNKNRNYEILYGRDHVIYINTNILDEAVWVKQALEKNQPGKPVRVINPDDESIRIFS WLADNFPDLQYFKLQLLDASNLRLTVSKQRNAITQQLIDNLIKGLLQTMPYASNISIAVLDDNVLESQAIETLSAIGLSY EKYKTANNVYFNIIGTLSDSELNKINNYVDEYYKQWGKQYVRFNVNLKNQDTNNSSFSYGDNRFEKSQGSNWTFQE
Sequences:
>Translated_396_residues MVFMENNDKFLSQELLESYAIRLLSGPLNGCEYEILNGRLLVIIGNDVSLGRSDAFSELPENTIVVPYGELTGSFEIIIT TDPDLVVTFRELTAQEPEDRTLTLNQQIEVLGLKFAVKEKNEVWQYSLPGIIENNIISTKQHFFSSKLFKYVMLFFLFAI IFIAFYIVNASNDPQLRHIDKILVNKNRNYEILYGRDHVIYINTNILDEAVWVKQALEKNQPGKPVRVINPDDESIRIFS WLADNFPDLQYFKLQLLDASNLRLTVSKQRNAITQQLIDNLIKGLLQTMPYASNISIAVLDDNVLESQAIETLSAIGLSY EKYKTANNVYFNIIGTLSDSELNKINNYVDEYYKQWGKQYVRFNVNLKNQDTNNSSFSYGDNRFEKSQGSNWTFQE >Mature_396_residues MVFMENNDKFLSQELLESYAIRLLSGPLNGCEYEILNGRLLVIIGNDVSLGRSDAFSELPENTIVVPYGELTGSFEIIIT TDPDLVVTFRELTAQEPEDRTLTLNQQIEVLGLKFAVKEKNEVWQYSLPGIIENNIISTKQHFFSSKLFKYVMLFFLFAI IFIAFYIVNASNDPQLRHIDKILVNKNRNYEILYGRDHVIYINTNILDEAVWVKQALEKNQPGKPVRVINPDDESIRIFS WLADNFPDLQYFKLQLLDASNLRLTVSKQRNAITQQLIDNLIKGLLQTMPYASNISIAVLDDNVLESQAIETLSAIGLSY EKYKTANNVYFNIIGTLSDSELNKINNYVDEYYKQWGKQYVRFNVNLKNQDTNNSSFSYGDNRFEKSQGSNWTFQE
Specific function: Required for invasion of epithelial cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013387 - InterPro: IPR019029 [H]
Pfam domain/function: PF09480 PrgH [H]
EC number: NA
Molecular weight: Translated: 45624; Mature: 45624
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFMENNDKFLSQELLESYAIRLLSGPLNGCEYEILNGRLLVIIGNDVSLGRSDAFSELP CEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHCC ENTIVVPYGELTGSFEIIITTDPDLVVTFRELTAQEPEDRTLTLNQQIEVLGLKFAVKEK CCCEEEEECCCCCCEEEEEECCCCEEEEEHHHHCCCCCCCEEEECCEEEEEEEEEEEECC NEVWQYSLPGIIENNIISTKQHFFSSKLFKYVMLFFLFAIIFIAFYIVNASNDPQLRHID CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHH KILVNKNRNYEILYGRDHVIYINTNILDEAVWVKQALEKNQPGKPVRVINPDDESIRIFS HHHHCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE WLADNFPDLQYFKLQLLDASNLRLTVSKQRNAITQQLIDNLIKGLLQTMPYASNISIAVL EHHCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE DDNVLESQAIETLSAIGLSYEKYKTANNVYFNIIGTLSDSELNKINNYVDEYYKQWGKQY CCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCEE VRFNVNLKNQDTNNSSFSYGDNRFEKSQGSNWTFQE EEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure MVFMENNDKFLSQELLESYAIRLLSGPLNGCEYEILNGRLLVIIGNDVSLGRSDAFSELP CEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEECCCCCCCCCHHHHHCC ENTIVVPYGELTGSFEIIITTDPDLVVTFRELTAQEPEDRTLTLNQQIEVLGLKFAVKEK CCCEEEEECCCCCCEEEEEECCCCEEEEEHHHHCCCCCCCEEEECCEEEEEEEEEEEECC NEVWQYSLPGIIENNIISTKQHFFSSKLFKYVMLFFLFAIIFIAFYIVNASNDPQLRHID CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHH KILVNKNRNYEILYGRDHVIYINTNILDEAVWVKQALEKNQPGKPVRVINPDDESIRIFS HHHHCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEE WLADNFPDLQYFKLQLLDASNLRLTVSKQRNAITQQLIDNLIKGLLQTMPYASNISIAVL EHHCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE DDNVLESQAIETLSAIGLSYEKYKTANNVYFNIIGTLSDSELNKINNYVDEYYKQWGKQY CCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCEE VRFNVNLKNQDTNNSSFSYGDNRFEKSQGSNWTFQE EEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476203; 11677609 [H]