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The map label for this gene is traP

Identifier: 218692891

GI number: 218692891

Start: 84225

End: 84815

Strand: Reverse

Name: traP

Synonym: p1ECUMN_0106

Alternate gene names: 218692891

Gene position: 84815-84225 (Counterclockwise)

Preceding gene: 218692892

Following gene: 218692890

Centisome position: 69.35

GC content: 50.08

Gene sequence:

>591_bases
ATGGCAAATAATATGTCGTCCCGTCAGGCGTGCCATGCCGCCCGGTATGTTGTCGCCCGGGTTCTGCGAGGACTGTTCTG
GTGTCTGAAGTACACCGTCATTCTGCCACTGGCCACAATGGCCCTGATGGCTCTGTTTGTTTTATGGAAGGACAACACCA
CGCCGGGGAAATTACTGGTTAAGGAGATTAACTTCGTAAGACAAACAGCACCTGCCGGACAGTTCCCGGTCAGTGAATGC
TGGTTTTCTTCCTCTGATTCTTCAGGCAGATCAGAAATACAGGATATCTGCCATTACCGCGCGGCTGATGCTGCAGATTA
TGTCAGGGAGACTGACCGGTCACTGATGCAACTGGTCACCGCATTATGGGCAACACTGGCACTGATGTATGTCTCGCTGG
CAGCGATCACCGGGAAATATCCGGTGCGACCCGGAAAAATGAAATGTATCCGGGTGGTAACCGCAGATGAACATCTGAAG
GAAGTTTATACGGAAGACGCTTCCCTGCCGGGAAAAATCAGGAAATGCCCTGTTTATCTTCCTGATGACAGAACAAACAG
AAACAACGGAGATAAAAATGAACATGCGTAA

Upstream 100 bases:

>100_bases
GAAAGTCATCTTAACGGCTTTAATACTGACCAGATGCTGAAGCAGCTGGGCAACCTGAATCCGCAGCAGTTTATGTCCGG
CAGCCAGGGAGGAGGCAACG

Downstream 100 bases:

>100_bases
TATTAATGCTATTACAGCCCTTTCTGTACCGGGTAAAACTATGTCAGATGATTTTATGCATGCTGTTCTCAGTAACTGCA
CCACAAGAATCGTCCTTCCT

Product: conjugal transfer protein TraP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLVKEINFVRQTAPAGQFPVSEC
WFSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVTALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLK
EVYTEDASLPGKIRKCPVYLPDDRTNRNNGDKNEHA

Sequences:

>Translated_196_residues
MANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLVKEINFVRQTAPAGQFPVSEC
WFSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVTALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLK
EVYTEDASLPGKIRKCPVYLPDDRTNRNNGDKNEHA
>Mature_195_residues
ANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLVKEINFVRQTAPAGQFPVSECW
FSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVTALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLKE
VYTEDASLPGKIRKCPVYLPDDRTNRNNGDKNEHA

Specific function: Unknown. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009913 [H]

Pfam domain/function: PF07296 TraP [H]

EC number: NA

Molecular weight: Translated: 22020; Mature: 21888

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KEINFVRQTAPAGQFPVSECWFSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVT
HHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
ALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLKEVYTEDASLPGKIRKCPVYL
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEC
PDDRTNRNNGDKNEHA
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KEINFVRQTAPAGQFPVSECWFSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVT
HHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
ALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLKEVYTEDASLPGKIRKCPVYL
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEC
PDDRTNRNNGDKNEHA
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7915817 [H]