| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is uhpB [H]
Identifier: 218692577
GI number: 218692577
Start: 4976192
End: 4977733
Strand: Reverse
Name: uhpB [H]
Synonym: ECED1_5044
Alternate gene names: 218692577
Gene position: 4977733-4976192 (Counterclockwise)
Preceding gene: 218692578
Following gene: 218692576
Centisome position: 95.55
GC content: 52.01
Gene sequence:
>1542_bases ATGTCGCGTAACCTTCGTCATTGGGTGATTTCGCTGTTTATTGTGCTGGCCTGGGGAAGCGGCTGGCTGATGTTGTGGAC GCTCAGCTTTTATCTGACCAATAACGGTCAACAGGCAGTGTTATTTCTGCCGCACGGAGTTTACCTCGCTTTTCTTATTT TGCACTCTCGCCGTTATTGGCCTGCGTTGGTGCTCCCCCCTTTGCTGATGATGTTCTGGCTGCACAGCGAGCAACTGTTG AATGGCTATCTCATGCTGGCAACGCCGGTTATTAGCCTGCTTCCTGCCATCATTGCACAAAACGTCTGGCACCGTTTTCC ACTTTACTGGCAGCGTCTGACGTTGCTGTTAGCCTCAGTAACAGCAGCTTCATTGCTGAATACAGCCATGCTAACCCCTT TTATGTCAGGCCCAATAATGCTGCCCGGTCTGACCTCATTTACCGGCGGCGTATTGTTGACGCCGTTTGTCTATCTTATC TTTGAGTTTCTGCGCCAGCAGCATCGCTATCAGCTTCTGAGACTCGATACGCATAATCCCCCCTTGCGAACCTCTTTAAT CATCTGGTGTAGCCTGTTTTTTATTATTGGTATCGGCACCCAGATGGTGTTGTCGCCTGAAATCGAACGCCTGCTGCTGA TCGTGGTATTTCTACCCAATGTAGTCATGGCCTGGAAATTTGGCTGGCAAGGGGGCGTACTCTCGGGGCTTTTGGGCAGC ATGATGATCACTATTGCCCGCCAGATTGGTGTGGGCTTTAGTAACCTGGTGGAACTGGAGATTTTTCTCGCAACCCAGGC ATTGCTGGGAATTGGCCTGGGCATTGCCATTAGTCGGCAGCAACATCTGGCGCTAAACCTGCATCATTACCGTCAGCGAC TGGAGGCAGAACTGGCAGCACGGCGGGCATTGGCTGAAAAGCTGATCCATACCGAGGAAGACACGCGTAAAAGCCTGGCT CGCGAGCTGCACGACGAAATCGGTCAGAACATTACCGCCATTCAGATCCAGTCGCAACTGGTGACGCGGGCACGCGATCC GGCGCAAGTTCATTCCGCAGCCAGCCAAATCAACGAACTCGCCCGCCGCATTCATCTCTCCACCCGTCAGTTGCTGCGCC AGTTGCGGCCCCCCGCGCTTGATGAACTGACATTCCGCGAAGCATTACTTCATCTGATTAATGAATTTGCCTTTAGTGAA CTCGGCATTCATTGCCAGTTTACCTATCAACTAACCACCACGCCAGAAAACGAAACGGTTCGCTTTACACTGTATCGGTT ATTGCAGGAGTTACTCAATAATGTCTGTAAACACGCCGGAGCCAGCGAAGTGACGATTATTCTGCGCCAGCAGGGAGAGA TATTGCACCTAGAGGTCAGCGACAACGGTGTGGGGATTGCCAGCGGGAAAATGACCGGATTTGGCATTCAGGGGATGCGT GAACGCGTCAGTGCCCTGGGCGGCGACTTAACGCTCGAAAAACATAACGGTACGCGGGTAATTGTTAACCTGCCCACATT TTTGCAACAAATCGCCGGATAA
Upstream 100 bases:
>100_bases TACATGTACATCGCGCCAACGTGCTGGGAAAACTGAACTGTCATAGCACCATTGAGCTGGTGCATTTTGCACTCAACCAC CATCTGCTGGCGGGGCATTA
Downstream 100 bases:
>100_bases CCAGGAAAAAGTCTTAGTCATCCCGGATTTTCTCTCATCCTCTTTCACTTTCATTTTCATATAGTCAGCAACATGGAGAC GACCATGCACGCGCGTTCAG
Product: putative sensor histidine protein kinase (uhpB-like)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MSRNLRHWVISLFIVLAWGSGWLMLWTLSFYLTNNGQQAVLFLPHGVYLAFLILHSRRYWPALVLPPLLMMFWLHSEQLL NGYLMLATPVISLLPAIIAQNVWHRFPLYWQRLTLLLASVTAASLLNTAMLTPFMSGPIMLPGLTSFTGGVLLTPFVYLI FEFLRQQHRYQLLRLDTHNPPLRTSLIIWCSLFFIIGIGTQMVLSPEIERLLLIVVFLPNVVMAWKFGWQGGVLSGLLGS MMITIARQIGVGFSNLVELEIFLATQALLGIGLGIAISRQQHLALNLHHYRQRLEAELAARRALAEKLIHTEEDTRKSLA RELHDEIGQNITAIQIQSQLVTRARDPAQVHSAASQINELARRIHLSTRQLLRQLRPPALDELTFREALLHLINEFAFSE LGIHCQFTYQLTTTPENETVRFTLYRLLQELLNNVCKHAGASEVTIILRQQGEILHLEVSDNGVGIASGKMTGFGIQGMR ERVSALGGDLTLEKHNGTRVIVNLPTFLQQIAG
Sequences:
>Translated_513_residues MSRNLRHWVISLFIVLAWGSGWLMLWTLSFYLTNNGQQAVLFLPHGVYLAFLILHSRRYWPALVLPPLLMMFWLHSEQLL NGYLMLATPVISLLPAIIAQNVWHRFPLYWQRLTLLLASVTAASLLNTAMLTPFMSGPIMLPGLTSFTGGVLLTPFVYLI FEFLRQQHRYQLLRLDTHNPPLRTSLIIWCSLFFIIGIGTQMVLSPEIERLLLIVVFLPNVVMAWKFGWQGGVLSGLLGS MMITIARQIGVGFSNLVELEIFLATQALLGIGLGIAISRQQHLALNLHHYRQRLEAELAARRALAEKLIHTEEDTRKSLA RELHDEIGQNITAIQIQSQLVTRARDPAQVHSAASQINELARRIHLSTRQLLRQLRPPALDELTFREALLHLINEFAFSE LGIHCQFTYQLTTTPENETVRFTLYRLLQELLNNVCKHAGASEVTIILRQQGEILHLEVSDNGVGIASGKMTGFGIQGMR ERVSALGGDLTLEKHNGTRVIVNLPTFLQQIAG >Mature_512_residues SRNLRHWVISLFIVLAWGSGWLMLWTLSFYLTNNGQQAVLFLPHGVYLAFLILHSRRYWPALVLPPLLMMFWLHSEQLLN GYLMLATPVISLLPAIIAQNVWHRFPLYWQRLTLLLASVTAASLLNTAMLTPFMSGPIMLPGLTSFTGGVLLTPFVYLIF EFLRQQHRYQLLRLDTHNPPLRTSLIIWCSLFFIIGIGTQMVLSPEIERLLLIVVFLPNVVMAWKFGWQGGVLSGLLGSM MITIARQIGVGFSNLVELEIFLATQALLGIGLGIAISRQQHLALNLHHYRQRLEAELAARRALAEKLIHTEEDTRKSLAR ELHDEIGQNITAIQIQSQLVTRARDPAQVHSAASQINELARRIHLSTRQLLRQLRPPALDELTFREALLHLINEFAFSEL GIHCQFTYQLTTTPENETVRFTLYRLLQELLNNVCKHAGASEVTIILRQQGEILHLEVSDNGVGIASGKMTGFGIQGMRE RVSALGGDLTLEKHNGTRVIVNLPTFLQQIAG
Specific function: Member of the two-component regulatory system uhpB/uhpA involved in the regulation of the uptake of hexose phosphates. UhpB functions as a membrane-associated protein kinase that phosphorylates uhpA in response to environmental signals [H]
COG id: COG3851
COG function: function code T; Signal transduction histidine kinase, glucose-6-phosphate specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=509, Percent_Identity=33.2023575638507, Blast_Score=209, Evalue=5e-55, Organism=Escherichia coli, GI1787474, Length=228, Percent_Identity=29.8245614035088, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788812, Length=204, Percent_Identity=28.921568627451, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR007895 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3; PF05231 MASE1 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 57938; Mature: 57807
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNLRHWVISLFIVLAWGSGWLMLWTLSFYLTNNGQQAVLFLPHGVYLAFLILHSRRYW CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEEECHHHHHHHHHHHCCCCC PALVLPPLLMMFWLHSEQLLNGYLMLATPVISLLPAIIAQNVWHRFPLYWQRLTLLLASV CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAASLLNTAMLTPFMSGPIMLPGLTSFTGGVLLTPFVYLIFEFLRQQHRYQLLRLDTHNP HHHHHHHHHHHHHHCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCC PLRTSLIIWCSLFFIIGIGTQMVLSPEIERLLLIVVFLPNVVMAWKFGWQGGVLSGLLGS CHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH MMITIARQIGVGFSNLVELEIFLATQALLGIGLGIAISRQQHLALNLHHYRQRLEAELAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHH RRALAEKLIHTEEDTRKSLARELHDEIGQNITAIQIQSQLVTRARDPAQVHSAASQINEL HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHH ARRIHLSTRQLLRQLRPPALDELTFREALLHLINEFAFSELGIHCQFTYQLTTTPENETV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHH RFTLYRLLQELLNNVCKHAGASEVTIILRQQGEILHLEVSDNGVGIASGKMTGFGIQGMR HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCEEECCCCCCCCHHHHH ERVSALGGDLTLEKHNGTRVIVNLPTFLQQIAG HHHHHCCCCEEEEECCCCEEEEECHHHHHHHCC >Mature Secondary Structure SRNLRHWVISLFIVLAWGSGWLMLWTLSFYLTNNGQQAVLFLPHGVYLAFLILHSRRYW CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEEECHHHHHHHHHHHCCCCC PALVLPPLLMMFWLHSEQLLNGYLMLATPVISLLPAIIAQNVWHRFPLYWQRLTLLLASV CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAASLLNTAMLTPFMSGPIMLPGLTSFTGGVLLTPFVYLIFEFLRQQHRYQLLRLDTHNP HHHHHHHHHHHHHHCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCC PLRTSLIIWCSLFFIIGIGTQMVLSPEIERLLLIVVFLPNVVMAWKFGWQGGVLSGLLGS CHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH MMITIARQIGVGFSNLVELEIFLATQALLGIGLGIAISRQQHLALNLHHYRQRLEAELAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHH RRALAEKLIHTEEDTRKSLARELHDEIGQNITAIQIQSQLVTRARDPAQVHSAASQINEL HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHH ARRIHLSTRQLLRQLRPPALDELTFREALLHLINEFAFSELGIHCQFTYQLTTTPENETV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHH RFTLYRLLQELLNNVCKHAGASEVTIILRQQGEILHLEVSDNGVGIASGKMTGFGIQGMR HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCEEECCCCCCCCHHHHH ERVSALGGDLTLEKHNGTRVIVNLPTFLQQIAG HHHHHCCCCEEEEECCCCEEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3301805; 1569007; 7686882; 9278503 [H]