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The map label for this gene is virB9 [H]

Identifier: 218689995

GI number: 218689995

Start: 2205648

End: 2206556

Strand: Direct

Name: virB9 [H]

Synonym: ECED1_2268

Alternate gene names: 218689995

Gene position: 2205648-2206556 (Clockwise)

Preceding gene: 218689994

Following gene: 218689996

Centisome position: 42.34

GC content: 55.89

Gene sequence:

>909_bases
ATGATGAAAAAGTTAACGTTTACCGCACTGGCACTGATGATGTGCGGCGCGGCATGGGCTGCGGCCATACCGCAGGCAAG
CCGCTATGACTCCCGCGTGCAGCAGGTTATCTATAACCCGCAGAACGTCACTGTCGTTAACACCAAACCCGGCTTTATGA
CAACGCTAGTCTTTGATAACGATGAGGCGGTCATAAGCGCCAAACCTGGCTTTGATGAGGCGTGGGAAGCCACGCCGGAT
GCAAACCGGGTCAACGTTCGCCCGGTCGCGCTCACGCAGGGAGCGCCCGGAGAAGATGGCAACACAACGCAGGTCGTGAT
CCCCCCGAACAGCCGGGACTGGCATACCAATATGCTGGTTGTCACCAGTAAGCGCCTGTACAACGTCGAGCTGAACGTCA
TCGATGATAAATCGGCACAACAACCCGCTTTCCAGGTGAGCTATCGCTATCCGGGCGAAGAACGGGACAAAGCGAGCCGG
GAGGCGACGGCCAGACAGCGCGAGTGGGAGCAGAAACAGCAACAGGCCAGCGTCCAGAAAGCGCTGAACTCGGCGCAGAC
GCCCCGCAACTGGAGTTACACCAAATATCCGGGCAAAGGCAGTTTCAACATTGTTCCCGATTTTGCTTACGACGATGGCC
GCTTTACGTTCGTGGGCTTCTCCCCGTCTAAGTCCATTCCTTCCGTCACCAAAGAGCTGAACGGCAAAGAGCATGTGGTT
AACAGCAGTATCCAGAAGAAAGGCGATTTCACCGTACTGGTGATTCAGGAGGTGACGCCACGCCTAGTACTGCGTTCCGG
TAATGCCGTTGTGGGTCTGGAAAATAGCGGATTTGGCAAGGTACACGCCGCCGATGGTTCCACCGTATCCCGGCAGGTGG
AAAGAGTGGAAAAACCGGAATCCAATTAA

Upstream 100 bases:

>100_bases
CTAACCCTGACAAGGAAATGAGCGATGCGGAACGCGAGATCAACTACTTCGGCTTTACCGTCACCAGTTGGCAGACCGAC
CGCGAAATCCGGGGAGGTGA

Downstream 100 bases:

>100_bases
CCTATAAAAATATTTTTATAAAAGGAAACGTGCATATGAACGACGAAAACAAAATGCCTGTGCCGGATGAAGCGCAGGCA
TTCCCGGCACACGCTGAGGA

Product: putative type IV secretory pathway VirB9 component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MMKKLTFTALALMMCGAAWAAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDNDEAVISAKPGFDEAWEATPD
ANRVNVRPVALTQGAPGEDGNTTQVVIPPNSRDWHTNMLVVTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASR
EATARQREWEQKQQQASVQKALNSAQTPRNWSYTKYPGKGSFNIVPDFAYDDGRFTFVGFSPSKSIPSVTKELNGKEHVV
NSSIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPESN

Sequences:

>Translated_302_residues
MMKKLTFTALALMMCGAAWAAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDNDEAVISAKPGFDEAWEATPD
ANRVNVRPVALTQGAPGEDGNTTQVVIPPNSRDWHTNMLVVTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASR
EATARQREWEQKQQQASVQKALNSAQTPRNWSYTKYPGKGSFNIVPDFAYDDGRFTFVGFSPSKSIPSVTKELNGKEHVV
NSSIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPESN
>Mature_302_residues
MMKKLTFTALALMMCGAAWAAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDNDEAVISAKPGFDEAWEATPD
ANRVNVRPVALTQGAPGEDGNTTQVVIPPNSRDWHTNMLVVTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASR
EATARQREWEQKQQQASVQKALNSAQTPRNWSYTKYPGKGSFNIVPDFAYDDGRFTFVGFSPSKSIPSVTKELNGKEHVV
NSSIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPESN

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 33402; Mature: 33402

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLTFTALALMMCGAAWAAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDN
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEC
DEAVISAKPGFDEAWEATPDANRVNVRPVALTQGAPGEDGNTTQVVIPPNSRDWHTNMLV
CCEEEEECCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEE
VTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASREATARQREWEQKQQQASVQK
EEECEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALNSAQTPRNWSYTKYPGKGSFNIVPDFAYDDGRFTFVGFSPSKSIPSVTKELNGKEHVV
HHHHCCCCCCCCEEECCCCCCCEEECCCEECCCEEEEEEECCCCCCCHHHHHCCCCHHHH
NSSIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPE
CCHHHCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCCEEEECCCCHHHHHHHHHHCCC
SN
CC
>Mature Secondary Structure
MMKKLTFTALALMMCGAAWAAAIPQASRYDSRVQQVIYNPQNVTVVNTKPGFMTTLVFDN
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEC
DEAVISAKPGFDEAWEATPDANRVNVRPVALTQGAPGEDGNTTQVVIPPNSRDWHTNMLV
CCEEEEECCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEE
VTSKRLYNVELNVIDDKSAQQPAFQVSYRYPGEERDKASREATARQREWEQKQQQASVQK
EEECEEEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALNSAQTPRNWSYTKYPGKGSFNIVPDFAYDDGRFTFVGFSPSKSIPSVTKELNGKEHVV
HHHHCCCCCCCCEEECCCCCCCEEECCCEECCCEEEEEEECCCCCCCHHHHHCCCCHHHH
NSSIQKKGDFTVLVIQEVTPRLVLRSGNAVVGLENSGFGKVHAADGSTVSRQVERVEKPE
CCHHHCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCCEEEECCCCHHHHHHHHHHCCC
SN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]