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The map label for this gene is ptlE [H]

Identifier: 218689994

GI number: 218689994

Start: 2204968

End: 2205651

Strand: Direct

Name: ptlE [H]

Synonym: ECED1_2267

Alternate gene names: 218689994

Gene position: 2204968-2205651 (Clockwise)

Preceding gene: 218689993

Following gene: 218689995

Centisome position: 42.33

GC content: 53.22

Gene sequence:

>684_bases
ATGAGTGAACAGAAATTAATAGCTGAATCCCGCACTTTTGAGCAGCAAATGATTGAGCGGGATAAACGCGCCACAAAAGC
CGGTTTTGTTGTTGGCGGTATGGGTCTGCTGATTGCGGTACTGGCGCTCGTCGCCGTGGTCGTGATGTTGCCGCTGAAAC
AGACGGACGTTGAGCTGTATACCTTGGATAACCACACAGGACGGGTGGAACACGTTACCCGGACATCGAAAACCAGCCTG
ACCGCAACAGAAGCCTATCAAAAGGCGATGGCCGCAAACTACGTCAAAGTGCGTGAGCGGTATGTCTATCCCTCTTTGCA
GGACGACTACGAGACGGTACAGGTCTACAACGCTCCCCAGGTAAACGATGACTATCTGGCGCTTTACGCCGGAAAAAACG
CCCCAGACAAGGTTTATAAGAACGGGGCGCACACCGTGAAAGTGGAGATCTTGTCCAACCAGATCACCGATGCGACAGCC
CCTGATAGGGTCGCCACCATCCGCTACAAGAAGATTATCCGCCGTCTGGCTGATAACAGCACCCGCAACGAATATTGGGA
TGCCCGGTTCACGTTCCATTCTAACCCTGACAAGGAAATGAGCGATGCGGAACGCGAGATCAACTACTTCGGCTTTACCG
TCACCAGTTGGCAGACCGACCGCGAAATCCGGGGAGGTGAATGA

Upstream 100 bases:

>100_bases
TGCGCGCTTTCTGGCTGCGCCCAGAACACGCCTCCCTCTGCCTTTAGCGGTAAGGGAGAACCCGTAAACACCCCTCAAAT
TATGGCGGAGTTAAACAGTC

Downstream 100 bases:

>100_bases
TGAAAAAGTTAACGTTTACCGCACTGGCACTGATGATGTGCGGCGCGGCATGGGCTGCGGCCATACCGCAGGCAAGCCGC
TATGACTCCCGCGTGCAGCA

Product: putative type IV secretory pathway VirB8 component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSEQKLIAESRTFEQQMIERDKRATKAGFVVGGMGLLIAVLALVAVVVMLPLKQTDVELYTLDNHTGRVEHVTRTSKTSL
TATEAYQKAMAANYVKVRERYVYPSLQDDYETVQVYNAPQVNDDYLALYAGKNAPDKVYKNGAHTVKVEILSNQITDATA
PDRVATIRYKKIIRRLADNSTRNEYWDARFTFHSNPDKEMSDAEREINYFGFTVTSWQTDREIRGGE

Sequences:

>Translated_227_residues
MSEQKLIAESRTFEQQMIERDKRATKAGFVVGGMGLLIAVLALVAVVVMLPLKQTDVELYTLDNHTGRVEHVTRTSKTSL
TATEAYQKAMAANYVKVRERYVYPSLQDDYETVQVYNAPQVNDDYLALYAGKNAPDKVYKNGAHTVKVEILSNQITDATA
PDRVATIRYKKIIRRLADNSTRNEYWDARFTFHSNPDKEMSDAEREINYFGFTVTSWQTDREIRGGE
>Mature_226_residues
SEQKLIAESRTFEQQMIERDKRATKAGFVVGGMGLLIAVLALVAVVVMLPLKQTDVELYTLDNHTGRVEHVTRTSKTSLT
ATEAYQKAMAANYVKVRERYVYPSLQDDYETVQVYNAPQVNDDYLALYAGKNAPDKVYKNGAHTVKVEILSNQITDATAP
DRVATIRYKKIIRRLADNSTRNEYWDARFTFHSNPDKEMSDAEREINYFGFTVTSWQTDREIRGGE

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virB8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007430 [H]

Pfam domain/function: PF04335 VirB8 [H]

EC number: NA

Molecular weight: Translated: 25873; Mature: 25742

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQKLIAESRTFEQQMIERDKRATKAGFVVGGMGLLIAVLALVAVVVMLPLKQTDVELY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEE
TLDNHTGRVEHVTRTSKTSLTATEAYQKAMAANYVKVRERYVYPSLQDDYETVQVYNAPQ
EECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
VNDDYLALYAGKNAPDKVYKNGAHTVKVEILSNQITDATAPDRVATIRYKKIIRRLADNS
CCCCEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC
TRNEYWDARFTFHSNPDKEMSDAEREINYFGFTVTSWQTDREIRGGE
CCCCCCCEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SEQKLIAESRTFEQQMIERDKRATKAGFVVGGMGLLIAVLALVAVVVMLPLKQTDVELY
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEE
TLDNHTGRVEHVTRTSKTSLTATEAYQKAMAANYVKVRERYVYPSLQDDYETVQVYNAPQ
EECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
VNDDYLALYAGKNAPDKVYKNGAHTVKVEILSNQITDATAPDRVATIRYKKIIRRLADNS
CCCCEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC
TRNEYWDARFTFHSNPDKEMSDAEREINYFGFTVTSWQTDREIRGGE
CCCCCCCEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]