Definition Escherichia fergusonii ATCC 35469 chromosome, complete genome.
Accession NC_011740
Length 4,588,711

Click here to switch to the map view.

The map label for this gene is 218550934

Identifier: 218550934

GI number: 218550934

Start: 3747778

End: 3748230

Strand: Direct

Name: 218550934

Synonym: EFER_3660

Alternate gene names: NA

Gene position: 3747778-3748230 (Clockwise)

Preceding gene: 218550933

Following gene: 218550937

Centisome position: 81.67

GC content: 43.71

Gene sequence:

>453_bases
GTGGCGCTGGTTCCCTGGGGCACACTGATTATGATTTGCGGCGTGGGTATGCTTATCCAGGTAGCGATTAAAGCGGGCAC
CATAGATATGTTAGCCAGCTGGGTGGGTACAAGTTTACCTACTGCAATAGTGCCCTTCGCTTTGGCTATTATTGGCGGGA
TGATGTCATTTTTCAGCAGTACACTAGGTGTAGTTTGTCCGGCATTATTCCCCATTATGCCTTCGATTGCCGAATCAACG
GGAATAGACGCTATTATATTATTTACCGCAACTGTTATTGGTGCTCAGGCAACCGCTATATCTCCTTTTTCATCCGGAGG
AAGTTTATTGCTCGGTTCATGTTCAAATGAAGAAGAGCGCAATGAAATGTTCCCGACCTTATTATTTAAAGCTGTTCCTG
TTTGCGTAATATTCTCATTAATAAGTGTGGCTATTATGATGATCCTGTTTTAG

Upstream 100 bases:

>100_bases
ATGTTGTTAAATTTATAAATATCCGGGTTGATGTTGGGTTAGTCGCCATTCTCTTTACCGTTATTGCGTTATTACTCAAT
CTCGGTGATGAAAAAAGGCG

Downstream 100 bases:

>100_bases
GGACTAAGGCCCATGGATGGGCCGAATAATCCGCAAACGCAGCACATGCAACGTGAATATCAGTGCTTCCCGATATATTT
ATCCTCCAACTTTGCGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Dicarboxylate Carrier MatC Domain-Containing Protein; Dicarboxylate Carrier Protein MatC; Membrane Associated Dicarboxylate Carrier Protein

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MALVPWGTLIMICGVGMLIQVAIKAGTIDMLASWVGTSLPTAIVPFALAIIGGMMSFFSSTLGVVCPALFPIMPSIAEST
GIDAIILFTATVIGAQATAISPFSSGGSLLLGSCSNEEERNEMFPTLLFKAVPVCVIFSLISVAIMMILF

Sequences:

>Translated_150_residues
MALVPWGTLIMICGVGMLIQVAIKAGTIDMLASWVGTSLPTAIVPFALAIIGGMMSFFSSTLGVVCPALFPIMPSIAEST
GIDAIILFTATVIGAQATAISPFSSGGSLLLGSCSNEEERNEMFPTLLFKAVPVCVIFSLISVAIMMILF
>Mature_149_residues
ALVPWGTLIMICGVGMLIQVAIKAGTIDMLASWVGTSLPTAIVPFALAIIGGMMSFFSSTLGVVCPALFPIMPSIAESTG
IDAIILFTATVIGAQATAISPFSSGGSLLLGSCSNEEERNEMFPTLLFKAVPVCVIFSLISVAIMMILF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15580; Mature: 15449

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVPWGTLIMICGVGMLIQVAIKAGTIDMLASWVGTSLPTAIVPFALAIIGGMMSFFSS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TLGVVCPALFPIMPSIAESTGIDAIILFTATVIGAQATAISPFSSGGSLLLGSCSNEEER
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH
NEMFPTLLFKAVPVCVIFSLISVAIMMILF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ALVPWGTLIMICGVGMLIQVAIKAGTIDMLASWVGTSLPTAIVPFALAIIGGMMSFFSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TLGVVCPALFPIMPSIAESTGIDAIILFTATVIGAQATAISPFSSGGSLLLGSCSNEEER
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH
NEMFPTLLFKAVPVCVIFSLISVAIMMILF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA