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The map label for this gene is ykgB [H]

Identifier: 218550937

GI number: 218550937

Start: 3750409

End: 3751467

Strand: Direct

Name: ykgB [H]

Synonym: EFER_3663

Alternate gene names: 218550937

Gene position: 3750409-3751467 (Clockwise)

Preceding gene: 218550934

Following gene: 218550938

Centisome position: 81.73

GC content: 43.44

Gene sequence:

>1059_bases
ATGACTGTATCCTACATTGGCACCCGAACTACTGCTTTACGTAACGCCAGAGGCAAAGGTTTAAGCGTCTGGAATATTAA
TGATGACACCGGGGAATGGACACAACTCCAGGTACTAAAAGAACAAGAAAATCCCTCTTATCTTACTTTCGATAACCAGC
AACAATTTTTATATTCAGTACACGGTGACTATACCGACGTTACCAGCTATGCCATAGATGAAACGACAGGCACTCTTACG
TTTATCAATAAAATCTCTTTGGAAGGTGGAAAAAACCCGGTTTTTATCACCGTTGATAAGAGTAATCGTTTCCTGTTAGT
TGCAACCTTGCAGGGCGGTAAAATATTTGTGATCCGCAGAGAAGAAAATGGCGCATTAGGCGAAGTTATCTTTACCTGGC
GTTTTGCTGGAAAAACGGATGACACTATTTCTCATGCTCATCAGTGCATTTGGGATCAAGATAAAAACTACCTGTTCGTG
CCGCAACAGGGGCGTGTGGTAGGTTACGCAGGCGTCAGCGTACTGAAATTTGATCCTGAGAGTGGCAGGCTTATTGAAAC
AGATTATTTTCGTGCCAGGGAATATGCAGAACCACGCCATATGGCGGTCCATCCGAATAATGAATATTGTTATCTGGTTA
ATGAAAAAGATAACACCGTCACCTGGTTTTTCTTCGATCAGCACAACGGCACGCTACAGCCACAACAGATAATTCCTGTT
CTTCCAGAAACATATACTGGTGAAGGGCAGTCCAGCGCCATTCTGGTTGATTGCAGCGGCAAATGGGTTATTGAGTCAAC
GCGTATTCATGAGTCACTGTCTATTTTCCGTATTAATCCTCTGACCGGTTATCTGACGCGTGTTGAAACGATGAAAGTTC
CAGGTAAAACACCACGCTTTATGACCTTTAATAGTACAGGTGATCGCCTTTATGTCGCGAATGAGGACAGTGACACAATT
ATCCAGTATGCCTTCGATAGCACAGACGGTAGCCTGACGCAATTACAGCCGGTGATTACGACAGAAAGCCCGGTCTGTAT
TTTATTTAAATCACTGTAA

Upstream 100 bases:

>100_bases
CACCATGCTGGTTATTAACTACTGGTCACAAAATCATTCACCATAAGAATAAATAAGACCAGATATAGCCTAATTTTTTA
TCTTACAATGGAAAAAAATC

Downstream 100 bases:

>100_bases
CCGGGGGAAAAATGCCAAATCTTGCTCTGGTTTCACTGCTTGCCATCGTGATTGCTATCGTCGTGGGTTTTTATAAAAAA
ACGAACGTTGGGATAATCAT

Product: lactonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTVSYIGTRTTALRNARGKGLSVWNINDDTGEWTQLQVLKEQENPSYLTFDNQQQFLYSVHGDYTDVTSYAIDETTGTLT
FINKISLEGGKNPVFITVDKSNRFLLVATLQGGKIFVIRREENGALGEVIFTWRFAGKTDDTISHAHQCIWDQDKNYLFV
PQQGRVVGYAGVSVLKFDPESGRLIETDYFRAREYAEPRHMAVHPNNEYCYLVNEKDNTVTWFFFDQHNGTLQPQQIIPV
LPETYTGEGQSSAILVDCSGKWVIESTRIHESLSIFRINPLTGYLTRVETMKVPGKTPRFMTFNSTGDRLYVANEDSDTI
IQYAFDSTDGSLTQLQPVITTESPVCILFKSL

Sequences:

>Translated_352_residues
MTVSYIGTRTTALRNARGKGLSVWNINDDTGEWTQLQVLKEQENPSYLTFDNQQQFLYSVHGDYTDVTSYAIDETTGTLT
FINKISLEGGKNPVFITVDKSNRFLLVATLQGGKIFVIRREENGALGEVIFTWRFAGKTDDTISHAHQCIWDQDKNYLFV
PQQGRVVGYAGVSVLKFDPESGRLIETDYFRAREYAEPRHMAVHPNNEYCYLVNEKDNTVTWFFFDQHNGTLQPQQIIPV
LPETYTGEGQSSAILVDCSGKWVIESTRIHESLSIFRINPLTGYLTRVETMKVPGKTPRFMTFNSTGDRLYVANEDSDTI
IQYAFDSTDGSLTQLQPVITTESPVCILFKSL
>Mature_351_residues
TVSYIGTRTTALRNARGKGLSVWNINDDTGEWTQLQVLKEQENPSYLTFDNQQQFLYSVHGDYTDVTSYAIDETTGTLTF
INKISLEGGKNPVFITVDKSNRFLLVATLQGGKIFVIRREENGALGEVIFTWRFAGKTDDTISHAHQCIWDQDKNYLFVP
QQGRVVGYAGVSVLKFDPESGRLIETDYFRAREYAEPRHMAVHPNNEYCYLVNEKDNTVTWFFFDQHNGTLQPQQIIPVL
PETYTGEGQSSAILVDCSGKWVIESTRIHESLSIFRINPLTGYLTRVETMKVPGKTPRFMTFNSTGDRLYVANEDSDTII
QYAFDSTDGSLTQLQPVITTESPVCILFKSL

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=349, Percent_Identity=23.7822349570201, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 39915; Mature: 39784

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSYIGTRTTALRNARGKGLSVWNINDDTGEWTQLQVLKEQENPSYLTFDNQQQFLYSV
CEEEEECCCHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCEEEEEE
HGDYTDVTSYAIDETTGTLTFINKISLEGGKNPVFITVDKSNRFLLVATLQGGKIFVIRR
CCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCEEEEEEE
EENGALGEVIFTWRFAGKTDDTISHAHQCIWDQDKNYLFVPQQGRVVGYAGVSVLKFDPE
CCCCCEEEEEEEEEECCCCCHHHHHHHHHEEECCCCEEEECCCCCEEEEECEEEEEECCC
SGRLIETDYFRAREYAEPRHMAVHPNNEYCYLVNEKDNTVTWFFFDQHNGTLQPQQIIPV
CCCEEEEHHHHHHHCCCCCEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHEEEC
LPETYTGEGQSSAILVDCSGKWVIESTRIHESLSIFRINPLTGYLTRVETMKVPGKTPRF
CCCCCCCCCCCCEEEEECCCCEEEEECEECCCEEEEEECCCCEEEEEEEEEECCCCCCCE
MTFNSTGDRLYVANEDSDTIIQYAFDSTDGSLTQLQPVITTESPVCILFKSL
EEECCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEECC
>Mature Secondary Structure 
TVSYIGTRTTALRNARGKGLSVWNINDDTGEWTQLQVLKEQENPSYLTFDNQQQFLYSV
EEEEECCCHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCEEEEEE
HGDYTDVTSYAIDETTGTLTFINKISLEGGKNPVFITVDKSNRFLLVATLQGGKIFVIRR
CCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCEEEEEEE
EENGALGEVIFTWRFAGKTDDTISHAHQCIWDQDKNYLFVPQQGRVVGYAGVSVLKFDPE
CCCCCEEEEEEEEEECCCCCHHHHHHHHHEEECCCCEEEECCCCCEEEEECEEEEEECCC
SGRLIETDYFRAREYAEPRHMAVHPNNEYCYLVNEKDNTVTWFFFDQHNGTLQPQQIIPV
CCCEEEEHHHHHHHCCCCCEEEECCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHEEEC
LPETYTGEGQSSAILVDCSGKWVIESTRIHESLSIFRINPLTGYLTRVETMKVPGKTPRF
CCCCCCCCCCCCEEEEECCCCEEEEECEECCCEEEEEECCCCEEEEEEEEEECCCCCCCE
MTFNSTGDRLYVANEDSDTIIQYAFDSTDGSLTQLQPVITTESPVCILFKSL
EEECCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]