Definition Escherichia fergusonii ATCC 35469 chromosome, complete genome.
Accession NC_011740
Length 4,588,711

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The map label for this gene is 218549366

Identifier: 218549366

GI number: 218549366

Start: 2084927

End: 2086771

Strand: Reverse

Name: 218549366

Synonym: EFER_2034

Alternate gene names: NA

Gene position: 2086771-2084927 (Counterclockwise)

Preceding gene: 218549367

Following gene: 218549365

Centisome position: 45.48

GC content: 46.02

Gene sequence:

>1845_bases
ATGATGAAAGTAACTGCAAACGGTAAGACATTTACCTTTCCTGATGGTACGAGCACCGAAGATATTGGCACCGCCATTGA
TGAGTATTTTGCTGGTCAGGCTGTTCAGCAACAAACAGTTAATCAGGCCAATAATGCACCAACACAGGAAGAACCATCAT
TGATGCAACAAGCTGGCGATTGGCTCACTGGTGGTCAAAGTGCAGGGCAAATTGCAGAACAGGCTGGTCGTGGTCTGGTA
AACATACCATTTGACGTATTGCAGGGTGGCGCAAGTCTGATTAATGCAATCAGTCAGGGGCTTGGTGGGCCAAAAGTATT
GGATGATGTTTATCGTCCAGTAGACAGACCGACAGACCCCTACGCACAAGCAGGTGAAACAATTGGTGGGTATTTAGTTC
CAGGAGTTGGAACGGCAGGAAGCATGGCTATTGGATCACTGGCAGAGGCCGCAAATCAGAAAGGCGATTTCGCACAAAAT
GCAGCAAGAAATGCCGGAGTTAACCTTGCCGCTCAGGGTGTTCTTTCCGCAGCAGCAAAGGGAATAGGGCGTGGAATAAC
GGCTATAAAAGGCGATATTGCGCCAGAAGTGGCGAAAAAAATTGCCACATCAGAATCGATGGGCGTGACACCTATGACAT
CTGATGTCATCCCACCGAAAAATGCATTCACTCGTGGTCTTACTCAGGATGCTGAGGGGGCCATTCTTGGAACTGGCAGT
AAAAGGGCAGAGCAATATGCAACGCGTAGTAAGTTGGTAAGTAATTATTTTGACCGTTTTGGTGAGTACAACCCTGATGA
TGTGGTGAAATCTCTGACCACCACGTTAAGGGGACGGAAGGATTCTGCTGGCGCAGTTATCAATGACGTCACCAATAAAA
TGGGTAATGCCGCAGTTGATACCACAAACACTATGAATGCTCTGAATACAGCGATCGCAAGACAGGAACGGCTTGGGACG
TCTGCCAATCAAAGCCTGCTTACATCCTTGCGTAACCTACGTGAAGAATTAGCAAACCCTGCAACTGATTTGGATGTTAC
GTTTGATCTCCTGCGTCAGCACAGAACGGCATTTAGATCTAATGTTCAGGGAGATGCTATGGTCTTCCCCAACCAGGCAA
AAGCAGCTACCAATATGGTAGAGAATGCAATGTCAAAAGACCTTCGTAACGCAGTTGCTAAAAACCTCGGTGCTTCAGAC
GCAGCAAAATACCTTAAAGCAAATTCCGATTATGCAAACGTTTATAATAAGGTGCTTAATAAAAACATTGCTAACAAGCT
CAATAAGGCAAGTAGTGAAGCCAGCCCTGAACTTATAAATACCGTTGTATTAAGCAGAAAACCATCTGACGTGAAACGAA
TCTGGATCGCATTGGATGATAAGGGGAAAGATGCTATGCGTGCAGCTTACGTCAGCAAAATAGCGGAAAAGGCCGGTGAC
TCTCCAGCCAAGTTCATCACGGAAGTTAATAAGCTGAAATCTCAGTCAGGTGGTGAAATTTACAACACTATTTTTTCTGG
AAAGCACATGAAAGAGCTTGATGCTCTTCATGAAGTTCTACAGCAAACAGCAAGGTCAGACACCGCAAATGTAGTAACTC
AGACAGGGCAATCGCAAGCCAACCGGATAAGAACGATTGGCGCAACGGCAACTCTTGGCGTATCAATGGGGCTTGAGGCT
GGTTTCGGTGCAATGATGCGCTTGTATGAGTCCAAAGCCGCACGGAATATGCTTCTTCGTTTGGCTAACACCAAAGCAGG
AACACCAGCCTATGAAAGAGCGCTAAATAATGCTGCAAATGCGATACGCCCTATACTTTCAAGCCAAATTACAGCAGAAC
AATAG

Upstream 100 bases:

>100_bases
ATACTGACGCAGCGCCAGCACAAGATTCGACACCTTCAGGAGAACCACGGAATCAGGTTGGATCATATACCTCAAAATCA
GGCATTCAATTTACGGTGGA

Downstream 100 bases:

>100_bases
AATAAATAATTAACTAAGTACATAACTACTGACAGATAACCAACGCAACGACCCAGCTTCGGCTGGGTTTTTTTATGCCC
AAATTTCACCGTGGCCACGC

Product: DNA transfer protein from phage

Products: NA

Alternate protein names: Injection Protein; DNA Transfer Protein Phage; DNA Transfer Protein Bacteriophage; APSE-2 Prophage

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGDWLTGGQSAGQIAEQAGRGLV
NIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQN
AARNAGVNLAAQGVLSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS
KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVDTTNTMNALNTAIARQERLGT
SANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASD
AAKYLKANSDYANVYNKVLNKNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD
SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQANRIRTIGATATLGVSMGLEA
GFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAANAIRPILSSQITAEQ

Sequences:

>Translated_614_residues
MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGDWLTGGQSAGQIAEQAGRGLV
NIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQN
AARNAGVNLAAQGVLSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS
KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVDTTNTMNALNTAIARQERLGT
SANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASD
AAKYLKANSDYANVYNKVLNKNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD
SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQANRIRTIGATATLGVSMGLEA
GFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAANAIRPILSSQITAEQ
>Mature_614_residues
MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGDWLTGGQSAGQIAEQAGRGLV
NIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQN
AARNAGVNLAAQGVLSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS
KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVDTTNTMNALNTAIARQERLGT
SANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASD
AAKYLKANSDYANVYNKVLNKNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD
SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQANRIRTIGATATLGVSMGLEA
GFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAANAIRPILSSQITAEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64931; Mature: 64931

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGD
CEEEECCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHCCC
WLTGGQSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDP
CCCCCCHHHHHHHHHCCCEEECCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
YAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAARNAGVNLAAQGVLSAAAK
HHHCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS
HHHCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCH
KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
TTNTMNALNTAIARQERLGTSANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRS
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
NVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASDAAKYLKANSDYANVYNKVLN
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
KNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC
SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQA
CHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH
NRIRTIGATATLGVSMGLEAGFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAAN
HHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AIRPILSSQITAEQ
HHHHHHHHHCCCCC
>Mature Secondary Structure
MMKVTANGKTFTFPDGTSTEDIGTAIDEYFAGQAVQQQTVNQANNAPTQEEPSLMQQAGD
CEEEECCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHCCC
WLTGGQSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDP
CCCCCCHHHHHHHHHCCCEEECCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
YAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAARNAGVNLAAQGVLSAAAK
HHHCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGAILGTGS
HHHCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCH
KRAEQYATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDSAGAVINDVTNKMGNAAVD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
TTNTMNALNTAIARQERLGTSANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRS
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
NVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASDAAKYLKANSDYANVYNKVLN
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
KNIANKLNKASSEASPELINTVVLSRKPSDVKRIWIALDDKGKDAMRAAYVSKIAEKAGD
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC
SPAKFITEVNKLKSQSGGEIYNTIFSGKHMKELDALHEVLQQTARSDTANVVTQTGQSQA
CHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH
NRIRTIGATATLGVSMGLEAGFGAMMRLYESKAARNMLLRLANTKAGTPAYERALNNAAN
HHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AIRPILSSQITAEQ
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA